Man pages for sbfnk/bpmodels
Simulating and Analysing Transmission Chain Statistics using Branching Process Models
| bpmodels-package | bpmodels: Simulating and Analysing Transmission Chain... |
| chain_ll | Calculate the log-likelihood for the outcome of a branching... |
| chain_sim | Simulate transmission chains using a branching process |
| chain_sim_susc | Simulate a single chain using a branching process while... |
| complementary_logprob | Calculates the complementary log-probability |
| covid19_sa | COVID-19 Data Repository for South Africa |
| dborel | Density of the Borel distribution |
| gborel_size_ll | Log-likelihood of the size of chains with gamma-Borel... |
| geom_length_ll | Log-likelihood of the length of chains with geometric... |
| nbinom_size_ll | Log-likelihood of the size of chains with Negative-Binomial... |
| offspring_ll | Log-likelihood of the length of chains with generic offspring... |
| pois_length_ll | Log-likelihood of the length of chains with Poisson offspring... |
| pois_size_ll | Log-likelihood of the size of chains with Poisson offspring... |
| rbinom_size | Samples size (the number of trials) of a binomial... |
| rborel | Random number generator from the Borel distribution |
| rgen_length | Samples chain lengths with given observation probabilities |
| rnbinom_mean_disp | Negative binomial random numbers parametrized in terms of... |
