Man pages for schmolze/saps-devel
Significance Analysis of Prognostic Signatures
| calculatePEnrichment | Compute P_enrichment |
| calculatePPure | Compute P_pure |
| calculatePRandom | Compute P_random |
| calculateQValue | Compute saps q-value |
| plotEnrichment | Plot concordance indices for a geneset |
| plotKM | Plot Kaplan-Meier curves for a gene set |
| plotRandomDensity | Draw density plot of 'p_pure' values for random gene sets |
| plotSapsScoreDensity | Draw density plot of 'saps_score' values for random gene sets |
| rankConcordance | Compute concordance indices |
| saps | Compute SAPS statistics |
| saps-package | Implements Significance Analysis of Prognostic Signatures... |
