Man pages for shaliulab/fslretho
fslretho: a Shiny GUI to the Rethomics suite
| aaaaaaaa | Quality control module Functionality to ensure data issues... |
| abort_bad_argument | Consistent and informative error |
| apply_pareto_rule | Wrap bin_apply_all and pareto_sd |
| bout_analysis | A version of sleepr::bout_analysis that allows programmatic... |
| check_installation | Verify the fslretho installation |
| copy_rv | Full copy a reactiveValues object |
| create_roi_table | Create header of table to store data of 1 fly |
| datetime_filename | Prepend a filename (or any character) with a datetime... |
| FSLRethoConfiguration | Configuration of FSLRetho |
| FUN_choices | Bin time series of boolean variables of high frequency (>=... |
| get_monitor_name | Given a metadata file, infer what type of monitor it is |
| get_progress_bar | Produce a Shiny progress bar |
| get_writable_path | Update the path so it is writable for sure |
| load_metadata | Read and validate provided metadata |
| main | Start an FSLRetho instance |
| make_toy_ethoscope_sqlite | A function to create a sqlite3 file under the extdata of the... |
| pareto_sd | Apply Pareto rule to wake behavior during SD |
| parse_sd_daterange | Incorporate daterange information to a behavr table |
| PERIODOGRAM_ALGORITHMS | Cyrcadian rhythm functionality in FSLRetho |
| populate_roi | Generate data for a fake fly and save it to a SQLite table |
| populate_table | Generate fake data for a fly |
| premadePlotsServer | Premade plots without any user tweaking |
| read_dam_metadata | Load a DAM metadata .csv into R |
| read_metadata | Load an ethoscope metadata .csv into R and perform basic... |
| rejoin_rv | Transform the passed rv with slots data and name so the... |
| reproducibilityModuleServer | Return a script that reproduces the fslretho results Ideally... |
| scoreDataServer | Shiny module to automatically score a raw behavr table |
| score_monitor | Annotate behavior coming from DAM or ethoscope |
| sd_inprogress_annotation | Annotate a behavr with a SD treatment progress A new 'sd_on'... |
| shinydashboard_ui | A UI for fslretho |
| viewMetadataUI | Display a data table output of the uploaded metadata It can... |
| watch_input | Declare an observer for every data slot in the passed... |
| welcomePageUI | UI for the FSLRetho welcome page |
| zip_database | Export a database of multiple files into a single .zipo |
