API for shannong19/catalyst
| Global functions | |
|---|---|
| AMSIR | Source code |
| AMSIR_sus_inner | Source code |
| AMTime_SIR | Source code |
| AtoU_SIR | Source code |
| AtoX | Source code |
| KM_prob | Source code |
| KM_probG | Source code |
| RF_prob | Source code |
| RF_probG | Source code |
| UtoA_SIR | Source code |
| UtoX_SIR | Source code |
| addClosureNbrs | Source code |
| aggregate_X | Source code |
| am_plot_mean_var | Source code |
| am_sir | Source code |
| am_sir_one_sim | Source code |
| assign.byage | Source code |
| assign_inf_recov_dates | Source code |
| cm_sir | Source code |
| combine_ests | Source code |
| combine_sims_X | Source code |
| countContacts | Source code |
| countIntersect | Source code |
| deg_to_rad_rcpp | Source code |
| df_to_pct | Source code |
| dist_haversine_rcpp | Source code |
| euc_dist | Source code |
| extractColA | Source code |
| extractRowA | Source code |
| format_ests | Source code |
| format_ests.loglinear | Source code |
| format_ests.reg | Source code |
| format_ests.tern | Source code |
| format_obs | Source code |
| format_sims_X | Source code |
| get_CM_prob_inf | Source code |
| get_n_nbr_inf | Source code |
| get_prob_inf | Source code |
| get_quar_inds | Source code |
| group_to_agent_par | Source code |
| hello | Man page |
| initializeNeighbors | Source code |
| loglike_SIR_CM | Source code |
| loglike_agent_sir | Source code |
| loglike_sir | Source code |
| loglike_sir.U | Source code |
| loglike_sir.UX | Source code |
| loglike_sir.X | Source code |
| loglike_sirG | Source code |
| loglike_sirG.X | Source code |
| makeStateVec | Source code |
| min_mse_obj | Source code |
| mse_bgn | Source code |
| mstat | Source code |
| mstat_inner | Source code |
| my_theme | Source code |
| nbrsByDist | Source code |
| plot_epidemic_df | Source code |
| plot_epidemic_summary | Source code |
| plot_ests | Source code |
| plot_ests.loglinear | Source code |
| plot_ests.state | Source code |
| plot_ests.ternary | Source code |
| plot_mean_var.reg | Source code Source code |
| plot_sims.loglin | Source code |
| plot_sims.reg | Source code |
| precompute_preventions_nbrs | Source code |
| r0_loglinear_sir | Source code |
| r0_var | Source code |
| rcppRev | Source code |
| rcpp_hello | Man page Source code |
| removeClosureNbrs | Source code |
| removeNeighbors | Source code |
| rescale_SIR | Source code |
| sample_int | Source code |
| sirLoop | Source code |
| sirLoopGroups | Source code |
| sir_init_groups | Source code |
| split_U | Source code |
| sse_sir | Source code |
| sse_sir.df | Source code |
| summarize_epidemic | Source code |
| totalX | Source code |
| udpate_A0 | Source code |
| updateAgent_SIR | Source code |
| updateNeighbors | Source code |
| updateStateByInds | Source code |
| updateStateVec | Source code |
| update_X | Source code |
| update_closure | Source code |
| update_preventions | Source code |
| update_preventions.quar_iso | Source code |
| whichState | Source code |
