siamakz/BNPseq: Bayesian Nonparametric Differential Expression Analysis of Sequencing Count Data
BNPseq fits a stochastic process from the family of Negative Binomial processes to the genomic counts in each experimental conditions. The output is the KL-divergence between posterior samples across conitions, that can be used for ranking differentially expressed genes.
Getting started
Browse package contents
Package details |
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| Maintainer | |
| License | GPL-3 |
| Version | 0.1.0 |
| URL | https://github.com/siamakz/BNPseq |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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