Man pages for siggitrausti/siggitRausti
Some helper functions for data analysis
| box_mets | Create beautiful boxplots from data. |
| calculate_cell_growth | Get growth rate from cell numbers and time |
| ColBrew | Color brewer |
| col_sds | Find column standard deviations |
| metPCA | PCA plotting of data: |
| min_max | Function to normalize data (good in 'apply' of rows) |
| nth_highest_val | Function to extract the n-th highest value in a vector |
| p_gain_analysis | # A quite raw function which can find ratios that are more... |
| plot_look_for_paper | Making plots look good |
| plot_metabolites | A function to plot multiple plots from a list to the same... |
| raw_2_mdv | Function to normalize a vector so that 1) No values are below... |
| remove_low_variance | A function to remove rows with zero variance (where sd is... |
| remove_outliers | Remove outliers from vector above 1.25 x IQR |
| ROC_maker | Create beautiful boxplots from data. |
| row_sds | Find row standard deviations |
| sample_vector | A function for sampling n rows from dataframe. |
| sem | Function to output the standard error of mean from input... |
| standardize | Function to standardize dataframe (potentially more global... |
| surv_cutpoint_multiple | # A function to check whether multiple genes can be used to... |
| test_match_order | Function to check whether two vectors are in the same order... |
| t.test2 | A function to perform a two-sample t-test based on summary,... |
