Files in sistia01/DWLS
Gene Expression Deconvolution Using Dampened Weighted Least Squares
.DS_Store
.Rbuildignore
.Rhistory
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.gitignore
CRAN-RELEASE
DESCRIPTION
DWLS.Rproj
DWLS_0.1.0.pdf
NAMESPACE
NEWS.md
R/.DS_Store
R/DEAnalysisMAST.R
R/DEAnalysisSeurat.R
R/DEAnalysisSeuratIdents.R
R/MASTSignatureMatrixGivenDE.R
R/Mean.in.log2space.R
R/buildSignatureMatrixMAST.R
R/buildSignatureMatrixUsingSeurat.R
R/dataSC_3.R
R/findDampeningConstant.R
R/globals.R
R/m.auc.R
R/solveDampenedWLS.R
R/solveDampenedWLSj.R
R/solveOLS.R
R/solveOLSInternal.R
R/solveSVR.R
R/stat.log2.R
R/sysdata.rda
R/trimData.R
R/v.auc.R
README.md
cran-comments.md
data/.DS_Store
data/dataSC_3.RData
inst/.DS_Store
inst/CITATION
inst/R_Files_for_Data/Sig.R
inst/R_Files_for_Data/dataBulk.R
inst/R_Files_for_Data/dataSC_1.R
inst/R_Files_for_Data/dataSC_2.R
inst/R_Files_for_Data/labels.R
inst/R_Files_for_Data/loadData.R
inst/R_Files_for_Data/trueLabels.R
inst/extdata/Sig.RData
inst/extdata/dataBulk.RData
inst/extdata/dataSC.RData
inst/extdata/labels.RData
inst/extdata/results/CycISC_MIST.RData
inst/extdata/results/CycISC_MIST.rds
inst/extdata/results/CycISC_lrTest.csv
inst/extdata/results/EE_MIST.RData
inst/extdata/results/EE_MIST.rds
inst/extdata/results/EE_lrTest.csv
inst/extdata/results/Ent_MIST.RData
inst/extdata/results/Ent_MIST.rds
inst/extdata/results/Ent_lrTest.csv
inst/extdata/results/Goblet_MIST.RData
inst/extdata/results/Goblet_MIST.rds
inst/extdata/results/Goblet_lrTest.csv
inst/extdata/results/NonCycISC_MIST.RData
inst/extdata/results/NonCycISC_MIST.rds
inst/extdata/results/NonCycISC_lrTest.csv
inst/extdata/results/Paneth_MIST.RData
inst/extdata/results/Paneth_MIST.rds
inst/extdata/results/Paneth_lrTest.csv
inst/extdata/results/PreEnt_MIST.RData
inst/extdata/results/PreEnt_MIST.rds
inst/extdata/results/PreEnt_lrTest.csv
inst/extdata/results/Sig.RData
inst/extdata/results/Sig.rds
inst/extdata/results/TA_MIST.RData
inst/extdata/results/TA_MIST.rds
inst/extdata/results/TA_lrTest.csv
inst/extdata/results/Tuft_MIST.RData
inst/extdata/results/Tuft_MIST.rds
inst/extdata/results/Tuft_lrTest.csv
inst/extdata/trueLabels.RData
inst/rmarkdown/.DS_Store
inst/rmarkdown/Reference_Manual_DWLS.md
inst/rmarkdown/templates/.DS_Store
inst/rmarkdown/templates/description/.DS_Store
inst/rmarkdown/templates/description/skeleton/.DS_Store
inst/rmarkdown/templates/description/template.yaml
man/DEAnalysisMAST.Rd
man/DEAnalysisSeurat.Rd
man/DEAnalysisSeuratIdents.Rd
man/MASTSignatureMatrixGivenDE.Rd
man/Mean.in.log2space.Rd
man/buildSignatureMatrixMAST.Rd
man/buildSignatureMatrixUsingSeurat.Rd
man/dataSC_3.Rd
man/findDampeningConstant.Rd
man/m.auc.Rd
man/solveDampenedWLS.Rd
man/solveDampenedWLSj.Rd
man/solveOLS.Rd
man/solveOLSInternal.Rd
man/solveSVR.Rd
man/stat.log2.Rd
man/trimData.Rd
man/v.auc.Rd
tests/.DS_Store
tests/testthat.R
tests/testthat/test-DEAnalysisMAST.R
tests/testthat/test-DWLS_CRAN.R
