sp2019-antibiotics/semiparclust: ECOFF Using Semi-Parametric Clustering

Computes the Epidemiological Cutoff (ECOFF) value of pairs of antibiotics and bacteria based on the algorithm described in Scrucca (2016) <doi:10.1016/j.csda.2015.01.006>. This value breaks the bacteria into resistant versus sensitive groups for each antibiotic. In addition the package includes a data set 'ZD' (inhibition zone diameters) which is used for the calculation of the ECOFF value.

Getting started

Package details

AuthorSaria Ahmad, Manlaibayar Bat-erdene, Michal Bechný, Jelena Saf, Radoslava Šuihrová
MaintainerJelena Saf <jelenasaf@outlook.de>
LicenseGPL-3
Version0.1.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("sp2019-antibiotics/semiparclust")
sp2019-antibiotics/semiparclust documentation built on Nov. 5, 2019, 9:14 a.m.