Man pages for ssayols/RVGO
Reduce + Visualize GO
| calculateSimMatrix | calculateSimMatrix Calculate the score similarity matrix... |
| getGoSize | getGoSize Get GO term size (# of genes) |
| getGoTerm | getGoTerm Get the description of a GO term |
| getTermDisp | getTermDisp Calculate the term dispensability score, defined... |
| getTermUniq | getTermUniq Calculate the term uniqueness score, defined as 1... |
| gg_color_hue | gg_color_hue Emulate ggplot2 color palette. |
| heatmapPlot | heatmapPlot Plot similarity matrix as a heatmap |
| loadOrgdb | loadOrgdb Load an orgdb object |
| reduceSimMatrix | reduceSimMatrix Reduce a set of GO terms based on their... |
| scatterPlot | scatterPlot Plot GO terms as scattered points. |
| shiny_rrvgo | shiny_rrvgo Launch an interactive web interface. |
| treemapPlot | treemapPlot Plot GO terms as a treemap. |
| wordcloudPlot | wordlcoudPlot Plot GO reduced terms as a wordcloud. |
