API for stephenslab/mr.mash.alpha
Multiple Regression with Multivariate Adaptive Shrinkage
| Global functions | |
|---|---|
| autoselect.mixsd | Man page Source code |
| chol2ldet | Source code |
| coef.mr.mash | Man page Source code |
| coef.mr.mash.rss | Man page Source code |
| compute_ELBO_fun | Source code |
| compute_ELBO_rss_fun | Source code |
| compute_ELBO_rss_terms | Source code |
| compute_ELBO_terms | Source code |
| compute_V_init | Source code |
| compute_canonical_covs | Man page Source code |
| compute_cov_canonical | Source code |
| compute_cov_flash | Source code |
| compute_data_driven_covs | Man page Source code |
| compute_logbf_R | Source code |
| compute_logbf_rcpp | Source code |
| compute_logbf_rss_R | Source code |
| compute_logbf_rss_rcpp | Source code |
| compute_rank_variables_BFmix | Source code |
| compute_rank_variables_BFmix_rss | Source code |
| compute_univariate_sumstats | Man page Source code |
| compute_var_part_ERSS | Source code |
| cov_empirical | Source code |
| create_cov_canonical | Source code |
| expand_covs | Man page Source code |
| extract_missing_Y_pattern | Source code |
| filter_precomputed_quants | Source code |
| get_univariate_sumstats | Source code |
| grid_max | Source code |
| grid_min | Source code |
| impute_missing_Y | Source code |
| impute_missing_Y_R | Source code |
| impute_missing_Y_rcpp | Source code |
| inner_loop_general | Source code |
| inner_loop_general_R | Source code |
| inner_loop_general_Rcpp | Source code |
| inner_loop_general_rcpp | Source code |
| inner_loop_general_rss | Source code |
| inner_loop_general_rss_R | Source code |
| inner_loop_general_rss_Rcpp | Source code |
| inner_loop_general_rss_rcpp | Source code |
| inner_loop_general_rss_sparse_rcpp | Source code |
| makePD | Source code |
| matrix_normal_indep_rows | Source code |
| mr.mash | Man page Source code |
| mr.mash.rss | Man page Source code |
| mr_mash_update_general | Source code |
| mr_mash_update_general_rss | Source code |
| normalize_cov | Source code |
| precompute_quants | Source code |
| predict.mr.mash | Man page Source code |
| predict.mr.mash.rss | Man page Source code |
| rescale_post_mean_covar | Source code |
| rescale_post_mean_covar_fast | Source code |
| rescale_post_mean_covar_rcpp | Source code |
| sample_norm | Source code |
| scale2_rcpp | Source code |
| scale_fast | Source code |
| scale_fast2 | Source code |
| scale_rcpp | Source code |
| simulate_mr_mash_data | Man page Source code |
| tr | Source code |
| update_V_fun | Source code |
| update_V_rss_fun | Source code |
| update_weights_em | Source code Source code |
