Files in suchestoncampbelllab/gwasurvivr
gwasurvivr: an R package for genome wide survival analysis
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/cGds.R
R/cImpute2.R
R/cMichigan.R
R/cMichiganSanger.R
R/cPlink.R
R/cPlinkGdsImpute2.R
R/cSanger.R
R/coxExtract.R
R/coxParam.R
R/coxPheno.R
R/coxSurv.R
R/gdsCoxSurv.R
R/getCoxOut.R
R/impute2CoxSurv.R
R/messageCompressionTime.R
R/michiganCoxSurv.R
R/plinkCoxSurv.R
R/sangerCoxSurv.R
R/survFit.R
R/survFitInt.R
README.md
inst/CITATION
inst/NEWS
inst/extdata/gds_example.gds
inst/extdata/gds_example.scan.rdata
inst/extdata/gds_example.snp.rdata
inst/extdata/impute_example.impute2.gz
inst/extdata/impute_example.impute2_sample
inst/extdata/michigan.chr14.dose.vcf.gz
inst/extdata/michigan.chr14.dose.vcf.gz.tbi
inst/extdata/plink_example.bed
inst/extdata/plink_example.bim
inst/extdata/plink_example.fam
inst/extdata/sanger.pbwt_reference_impute.vcf.gz
inst/extdata/sanger.pbwt_reference_impute.vcf.gz.tbi
inst/extdata/simulated_pheno.txt
man/gdsCoxSurv.Rd
man/impute2CoxSurv.Rd
man/michiganCoxSurv.Rd
man/plinkCoxSurv.Rd
man/sangerCoxSurv.Rd
tests/testthat.R
tests/testthat/_snaps/check_gds_results_unchanged.md
tests/testthat/_snaps/check_impute2_results_unchanged.md
tests/testthat/_snaps/check_michigan_results_unchanged.md
tests/testthat/_snaps/check_plink_results_unchanged.md
tests/testthat/_snaps/check_sanger_results_unchanged.md
tests/testthat/test-check_gds_results_unchanged.R
tests/testthat/test-check_impute2_results_unchanged.R
tests/testthat/test-check_michigan_results_unchanged.R
tests/testthat/test-check_plink_results_unchanged.R
tests/testthat/test-check_sanger_results_unchanged.R
vignettes/gwasurvivr_Introduction.Rmd
