Files in tanaylab/MCView

A Shiny App for Metacell Analysis

LICENSE.md NEWS.md R/MCView-package.R R/app_config.R R/app_modals.R R/app_server.R R/app_ui.R R/atlas_projection.R R/cell_types.R R/cluster.R R/gene_names.R R/golem_utils_server.R R/golem_utils_ui.R R/import.R R/import_metacell1.R R/metadata.R R/mod_about.R R/mod_annotate.R R/mod_atlas.R R/mod_cell_type.R R/mod_flow.R R/mod_gene_mc.R R/mod_gene_modules.R R/mod_inner_fold.R R/mod_manifold.R R/mod_markers.R R/mod_mc_mc.R R/mod_outliers.R R/mod_proj_fold.R R/mod_projection_qc.R R/mod_qc.R R/mod_query.R R/mod_samples.R R/mod_stdev_fold.R R/outliers.R R/plot_cell_type.R R/plot_gene_mc.R R/plot_gene_traj.R R/plot_markers_mat.R R/plot_mc2d_proj.R R/plot_mc_mc_gene.R R/plot_mc_time_dist.R R/plot_metadata.R R/plot_network.R R/plot_sample_types_bar.R R/plot_type_prediction_bar.R R/plot_vein.R R/project.R R/run_app.R R/umap.R R/utils_annot.R R/utils_cache.R R/utils_clipboard.R R/utils_diff_expr.R R/utils_diff_expr_box.R R/utils_download.R R/utils_dt.R R/utils_files.R R/utils_gene_expression.R R/utils_gene_mc.R R/utils_gene_modules.R R/utils_genes.R R/utils_graphs.R R/utils_heatmap.R R/utils_heatmap_help.R R/utils_markers.R R/utils_mc2d.R R/utils_mc_mc.R R/utils_metacells.R R/utils_metadata.R R/utils_network.R R/utils_plot.R R/utils_plotly.R R/utils_plotly_observers.R R/utils_projection_box.R R/utils_scatter_box.R R/utils_scdb.R R/utils_selectors.R R/utils_ui.R R/zzz.R README.Rmd README.md dev/debug.R dev/simulate_metadata.R inst/app.R inst/default-config/about.Rmd man/MCView-package.Rd man/cell_metadata_to_metacell.Rd man/create_bundle.Rd man/create_project.Rd man/dataset_ls.Rd man/dataset_rm.Rd man/import_cell_metadata.Rd man/import_dataset.Rd man/import_dataset_metacell1.Rd man/print.gt_custom.Rd man/run_app.Rd man/update_2d_projection.Rd man/update_cell_type_colors.Rd man/update_gene_modules.Rd man/update_metacell_types.Rd man/update_metadata.Rd man/update_metadata_colors.Rd start_app.R tests/testthat.R tests/testthat/helper-3_metadata.R tests/testthat/setup.R tests/testthat/test-1_project.R tests/testthat/test-2_import.R tests/testthat/test-3_metadata.R tests/testthat/test-4_annotations.R tests/testthat/test-5_app_run.R tests/testthat/test-6_bundle.R vignettes/Architecture.Rmd vignettes/Docker.Rmd vignettes/MCView.Rmd