Files in tangchao7498/DecodeR
Barcode demultiplexing of native RNAs nanopore sequencing

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DESCRIPTION

DecodeR.Rproj

DecodeR_0.1.0.tar.gz

NAMESPACE

R/DecodeR.R R/InternalFunctions.R README.md

Reproduction instructions/00.guppy_basecaller/01.20201127RNA_Guppy_Basecall.sh

Reproduction instructions/00.guppy_basecaller/02.20200605RNA_Guppy_Basecall.sh

Reproduction instructions/00.guppy_basecaller/03.20200620RNA_Guppy_Basecall.sh

Reproduction instructions/00.guppy_basecaller/04.20200902RNA_Guppy_Basecall.sh

Reproduction instructions/00.guppy_basecaller/05.20210703RNA_Guppy_Basecall.sh

Reproduction instructions/01.alignment/00.Reference_RNA_sequence.R

Reproduction instructions/01.alignment/01.minimap2_alignment.sh

Reproduction instructions/01.alignment/02.Reference_RNA_sequence.R

Reproduction instructions/01.alignment/03.minimap2_alignment.sh

Reproduction instructions/06.DecodingDeePlexiConAndPoreplex/01.MethodComparison/Our_Method_confusionMatrix_Vs_Poreplex.Rds

Reproduction instructions/06.DecodingDeePlexiConAndPoreplex/01.MethodComparison/Poreplex_CutOff_List.Rds

Reproduction instructions/06.DecodingDeePlexiConAndPoreplex/01.MethodComparison/Poreplex_confusionMatrix.Rds

Reproduction instructions/14.TumorMutation/01.Calling_Mutation.sh

Reproduction instructions/14.TumorMutation/02.Tumor_Mutation_Statistic_and_Plot.Rmd Reproduction instructions/14.TumorMutation/03.Tumor_Mutation_in_NGS.R

data/Model_2barcodes.rda

inst/extdata/demo2_0.fast5

inst/extdata/image1.png

inst/extdata/image2.png

inst/extdata/image3.png

man/DecodeR.Rd man/InterFuns.Rd

tangchao7498/DecodeR documentation built on May 27, 2023, 7:21 p.m.

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Note that we can't provide technical support on individual packages. You should contact the package authors for that.

tangchao7498/DecodeR
Barcode demultiplexing of native RNAs nanopore sequencing

Files in tangchao7498/DecodeR
Barcode demultiplexing of native RNAs nanopore sequencing

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tangchao7498/DecodeR Barcode demultiplexing of native RNAs nanopore sequencing

Files in tangchao7498/DecodeR Barcode demultiplexing of native RNAs nanopore sequencing

R Package Documentation

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We want your feedback!

tangchao7498/DecodeR
Barcode demultiplexing of native RNAs nanopore sequencing

Files in tangchao7498/DecodeR
Barcode demultiplexing of native RNAs nanopore sequencing