Man pages for tanyalrogers/GPEDM
Gaussian Process regression for Empirical Dynamic Modeling
| fitGP | Fit a GP model |
| fitGP_fish | Fit a "fisheries" GP model |
| getconditionals | Get conditional responses from a GP model |
| getR2 | Calculate R-squared |
| getR2pop | Calculate R-squared by population (and other stuff) |
| getrhomatrix | Get pairwise dynamic correlation matrix |
| GPEDM-package | Gaussian Process regression for Empirical Dynamic Modeling |
| HastPow3sp | Simulated time series from 3 species Hastings-Powell model |
| makelags | Generate delay vectors |
| makelags_iter | Make lag matrix for iterated prediction |
| msy_wrapper | Wrapper for computing MSY from a "fisheries model" |
| plot.GPpred | Plot predictions from a GP model |
| posdef | Find nearest positive definite matrix |
| predict.GP | Get predictions from a GP model |
| predict_iter | Get interated predictions from a GP model (or MSY from a... |
| predict_seq | Get sequentially updated predictions from a GP model |
| RickerHarvest | Simulated time series from a ricker model with fishing |
| shrimp | Brown shrimp in the Gulf of Mexico |
| summary.GP | Print a summary of a GP model |
| thetalog2pop | Simulated time series from 2 theta-logistic populations |
| trawl | NEFSC Fall Bottom Trawl Data (subset) |
