Files in tardipede/concatipede
Easy Concatenation of Fasta Sequences
.Rbuildignore
.Renviron
.Rinstignore
.github/workflows/github-ci.yml
.gitignore
.gitlab-ci.yml
.run_check_and_get_badge.R
.update-gh-pages.sh
DESCRIPTION
LICENSE
LICENSE.md
Makefile
NAMESPACE
NEWS.md
R/concatipede.R
R/concatipede_example.R
R/concatipede_prepare.R
R/find_fasta.R
R/get_genbank_table.R
R/helper_functions.R
R/matching.R
R/matching_helpers.R
R/read_xl.R
R/rename_sequences.R
R/utils-pipe.R
R/write_aln.R
R/write_xl.R
README.md
concatipede.Rproj
cran-comments.md
inst/CITATION
inst/extdata/COI_Macrobiotidae.fas
inst/extdata/ITS2_Macrobiotidae.fas
inst/extdata/LSU_Macrobiotidae.fas
inst/extdata/Macrobiotidae_seqnames.xlsx
inst/extdata/SSU_Macrobiotidae.fas
inst/extdata/sequences-test-matching.xlsx
man/auto_match_seqs.Rd
man/concatipede.Rd
man/concatipede_example.Rd
man/concatipede_prepare.Rd
man/figures/concatipede_hexagon.png
man/find_fasta.Rd
man/get_genbank_table.Rd
man/pipe.Rd
man/read_xl.Rd
man/rename_sequences.Rd
man/write_aln.Rd
man/write_xl.Rd
pkgdown/_pkgdown.yml
pkgdown/extra.css
rhub-check.R
sandbox/.gitignore
sandbox/matching.R
sandbox/sequences.xlsx
tests/testthat.R
tests/testthat/test-auto_match_seqs.R
tests/testthat/test-concatipede.R
tests/testthat/test-concatipede_prepare.R
tests/testthat/test-find_fasta.R
tests/testthat/test-integration.R
vignettes/.gitignore
vignettes/.install_extras
vignettes/COI_Macrobiotidae.fas
vignettes/ITS2_Macrobiotidae.fas
vignettes/LSU_Macrobiotidae.fas
vignettes/Macrobiotidae_seqnames.xlsx
vignettes/Package-usage.Rmd
vignettes/SSU_Macrobiotidae.fas
vignettes/concatipede_scheme.png
vignettes/edited_1.png
vignettes/edited_2.png
vignettes/edited_3.png
vignettes/template.png
