| autoInitConv | Run MCMC iterations until initial convergence |
| autoUpdate | Run MCMC iterations until full convergence |
| c.mcmc | Combine an mcmc object |
| c.mcmc.list | Combine an mcmc.list object |
| compress | Compress a FluHMM object |
| describe.FluHMM | Describe a 'FluHMM' object |
| FluHMM | Create a FluHMM object |
| makePriors | Create informative prior from other FluHMM objects |
| plot.FluHMM | Plot a FluHMM object |
| plot.FluJointHMM | Plot a FluJointHMM object |
| update.FluHMM | Generate posterior samples from a 'FluHMM' object |
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