Man pages for thomazbastiaanssen/anansi
Annotation-Based Analysis of Specific Interactions
| anansi | anansi: Annotation-based Analysis of Specific Interactions. |
| anansiCor | Compute r-statistics for each featureY-featureX pair in the... |
| anansiCorPvalue | Compute r-statistics for each featureY-featureX pair in the... |
| anansiCorTestByGroup | Run correlations for all interacting metabolites and... |
| anansiDiffCor | Run differential correlation analysis for all interacting... |
| anansiTale-class | An S4 class to contain all 'anansi' stats results so that... |
| AnansiWeb | AnansiWeb S4 container class |
| FMT_KOs | Snippet of the CLR-transformed inferred functional data from... |
| FMT_metab | Snippet of the CLR-transformed hippocampal metabolomics data... |
| FMT_metadata | Snippet of the metadata from the FMT Aging study. |
| getAnansi | anansi wrapper for the MultiAssayExperiment class |
| getGraph | Get a graph object out of an MultiFactor. |
| getWeb | weaveWeb wrapper for the MultiAssayExperiment class |
| is.categorical | Is character, factor or ordered factor |
| kegg_link | Use linking data from the KEGG database. |
| krebs | Simplified snippet of the Krebs cycle |
| MultiFactor | MultiFactor S4 container class |
| named_group_list | Provide name and levels for categories for group terms |
| named_term_list | Provide name and levels for categories |
| plotAnansi | miaViz style plotting wrapper for anansi output |
| randomAnansi | Generate a random AnansiWeb or MultiFactor |
| weaveWeb | Weave an AnansiWeb |
