Files in translational-genomics-laboratory/methXGB
Interpretation of DNA methylation data from tumour samples using XGBoost models
DESCRIPTION
NAMESPACE
R/buildSampleSheet.R
R/downloadIdat.R
R/getModelInfo.R
R/inferMethXGB.R
R/parseIdat.R
R/transformMethData.R
README.md
data/mval_demo.RData
data/xgb_immunescore_BLCA.RData
data/xgb_immunescore_BRCA.RData
data/xgb_immunescore_CESC.RData
data/xgb_immunescore_COAD.RData
data/xgb_immunescore_COADREAD.RData
data/xgb_immunescore_ESCA.RData
data/xgb_immunescore_GBMLGG.RData
data/xgb_immunescore_HNSC.RData
data/xgb_immunescore_KIRC.RData
data/xgb_immunescore_KIRP.RData
data/xgb_immunescore_LIHC.RData
data/xgb_immunescore_LUAD.RData
data/xgb_immunescore_LUSC.RData
data/xgb_immunescore_PAAD.RData
data/xgb_immunescore_PCPG.RData
data/xgb_immunescore_PRAD.RData
data/xgb_immunescore_SKCM.RData
data/xgb_immunescore_STAD.RData
data/xgb_immunescore_THCA.RData
data/xgb_immunescore_UCEC.RData
data/xgb_purity_BLCA.RData
data/xgb_purity_BRCA.RData
data/xgb_purity_CESC.RData
data/xgb_purity_COADREAD.RData
data/xgb_purity_ESCA.RData
data/xgb_purity_GBM.RData
data/xgb_purity_HNSC.RData
data/xgb_purity_KIRC.RData
data/xgb_purity_KIRP.RData
data/xgb_purity_LGG.RData
data/xgb_purity_LIHC.RData
data/xgb_purity_LUAD.RData
data/xgb_purity_LUSC.RData
data/xgb_purity_PAAD.RData
data/xgb_purity_PCPG.RData
data/xgb_purity_PRAD.RData
data/xgb_purity_SKCM.RData
data/xgb_purity_STAD.RData
data/xgb_purity_THCA.RData
data/xgb_purity_UCEC.RData
inst/extdata/model_table_immunescore.txt
inst/extdata/model_table_purity.txt
vignettes/OICR_logo.png
vignettes/~$thXGB_v1.docx
