DESCRIPTION
          
        
          
            
            NAMESPACE
          
        
          
            
            R/FitHiC.R
          
        
          
            
            R/RcppExports.R
          
        
          
            
            README.md
          
        
          
            
            inst/NEWS
          
        
          
            
            inst/extdata/biasPerLocus/Dixon_hESC_HindIII_hg18_w40000_chr1.gz
          
        
          
            
            inst/extdata/biasPerLocus/data_5000000_iced.matrix.biases.gz
          
        
          
            
            inst/extdata/contactCounts/Dixon_hESC_HindIII_hg18_combineFrags10_chr1.gz
          
        
          
            
            inst/extdata/contactCounts/Dixon_hESC_HindIII_hg18_w40000_chr1.gz
          
        
          
            
            inst/extdata/contactCounts/Dixon_mESC_HindIII_mm9_combineFrags10_chr1.gz
          
        
          
            
            inst/extdata/contactCounts/Duan_yeast_EcoRI.gz
          
        
          
            
            inst/extdata/contactCounts/Duan_yeast_HindIII.gz
          
        
          
            
            inst/extdata/contactCounts/data_5000000.matrix.gz
          
        
          
            
            inst/extdata/fragmentLists/Dixon_hESC_HindIII_hg18_combineFrags10_chr1.gz
          
        
          
            
            inst/extdata/fragmentLists/Dixon_hESC_HindIII_hg18_w40000_chr1.gz
          
        
          
            
            inst/extdata/fragmentLists/Dixon_mESC_HindIII_mm9_combineFrags10_chr1.gz
          
        
          
            
            inst/extdata/fragmentLists/Duan_yeast_EcoRI.gz
          
        
          
            
            inst/extdata/fragmentLists/Duan_yeast_HindIII.gz
          
        
          
            
            inst/extdata/fragmentLists/data_5000000_abs.bed.gz
          
        
          
            
            man/FitHiC.Rd
          
        
          
            
            src/FitHiC_init.c
          
        
          
            
            src/RcppExports.cpp
          
        
          
            
            src/helper.cpp
          
        
          
            
            vignettes/fithic.Rmd