Man pages for venelin/toyepidemic
Simulating epidemics with within-host strain mutation and between-host SIR dynamics
| calcValue | calculate phenotypic values |
| decomposeTrait | Decompose trait values according to the model z=G+I+E+epsilon |
| decomposeVar | Variance decomposition of trait values |
| extractDRCouples | Extract donor-recipient couples from an epidemic |
| extractPop | Extract a sub-population of individuals involved in an... |
| extractTree | Extract the transmission tree connecting sampled individuals... |
| generateGenotypes | Possible genotypes based on numbers of alleles at QTLs. |
| generateRateTransTemplate | Generate a state transition template matrix based on numbers... |
| newgennxNorm | simulating evolution on continuous time scale sde : numeric... |
| normReactPlot | norm-reaction plot |
| simulateEpidemic | Simulate within and between host dynamics in an epidemic |
