vqf/ciberAMP: mRNA and copy number data integrative algorithm.
ciberAMP performs copy number and mRNA expression data integration. It allows users to finde out copy number-driven gene's differential expression. It uses GISTIC and RNAseq data from TCGA to analyze the more than 11.000 samples across 33 different tumor cohorts.
Getting started
Browse package contents
Package details |
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| Bioconductor views | RNAseq SCNAs copy number alteration copy number and expression integration |
| Maintainer | |
| License | |
| Version | 0.0.0.9000 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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