Man pages for wStockhausen/tmbTCSAM02
A set of tools to set up input for, run, and interact with output from, tmbTCSAM02 model runs.
| extractTCSAM_AggCatchData | Extract aggregated abundance or biomass catch data for a... |
| extractTCSAM_BoundedParameterInfo | Extract bounded parameters info from a parsed file for a... |
| extractTCSAM_BoundedVectorInfo | Extract bounded vector parameters info from a parsed file for... |
| extractTCSAM_CatchData | Extract model catch data for a TCSAM02 model run from a list... |
| extractTCSAM_EffortData | Extract catch effort data for a TCSAM02 model run from a list... |
| extractTCSAM_ParamInfoFisheries | Extract model fisheries parameters info from a parsed file... |
| extractTCSAM_ParamInfoGrowth | Extract model growth parameters info from a parsed file for a... |
| extractTCSAM_ParamInfoNaturalMortality | Extract model natural mortality parameters info from a parsed... |
| extractTCSAM_ParamInfoRecruitment | Extract model recruitment parameters info from a parsed file... |
| extractTCSAM_ParamInfoSelFunctions | Extract model selectivity function parameters info from a... |
| extractTCSAM_ParamInfoSurveys | Extract model surveys parameters info from a parsed file for... |
| extractTCSAM_ParamInfoTerminalMolt | Extract model terminal molt parameters info from a parsed... |
| extractTCSAM_PriorInfo | Extract prior probability info from a character vector for a... |
| extractTCSAM_ZCsCatchData | Extract size composition data for a TCSAM02 model run from a... |
| parseTimeBlock | Parse a formatted time block |
| readTCSAM_Datasets | Read model datasets file for a TCSAM02 model run |
| readTCSAM_FleetData | Read model fleet data file for a TCSAM02 model run |
| readTCSAM_GrowthData | Read model growth data file for a TCSAM02 model run |
| readTCSAM_InputFiles | Read input files for a TCSAM02 model run |
| readTCSAM_MaturityOgiveData | Read model maturity ogive data file for a TCSAM02 model run |
| readTCSAM_ModelConfiguration | Read model configuration file for a TCSAM02 model run |
| readTCSAM_ModelParametersInfo | Read model parameters info file for a TCSAM02 model run |
| setGlobals | Set global values |
| subForKey | Substitute value for key |
