Files in waldronlab/MultiAssayExperiment
Software for the integration of multi-omics experiments in Bioconductor
.Rbuildignore
.gitattributes
.github/stale.yml
.github/workflows/pr_check.yml
.github/workflows/test-coverage.yml
.gitignore
DESCRIPTION
NAMESPACE
NEWS.md
R/ExperimentList-class.R
R/MatchedAssayExperiment-class.R
R/MultiAssayExperiment-class.R
R/MultiAssayExperiment-helpers.R
R/MultiAssayExperiment-methods.R
R/MultiAssayExperiment-pkg.R
R/MultiAssayExperiment-subset.R
R/MultiAssayExperimentToMAF.R
R/assay-methods.R
R/data.R
R/hasAssay.R
R/listToMap.R
R/mapToList.R
R/prepMultiAssay.R
R/reexports.R
R/saveHDF5MultiAssayExperiment.R
R/subsetBy-methods.R
R/upsetSamples.R
R/utilities.R
README.md
_pkgdown.yml
data/miniACC.RData
inst/CITATION
inst/REFERENCES.bib
inst/scripts/ExperimentList-Ex.R
inst/scripts/MultiAssayExperiment-Ex.R
inst/scripts/MultiAssayExperiment-methods-Ex.R
inst/scripts/listToMap-Ex.R
inst/scripts/miniACC.R
man/ExperimentList-class.Rd
man/ExperimentList.Rd
man/HDF5MultiAssayExperiment.Rd
man/MatchedAssayExperiment-class.Rd
man/MultiAssayExperiment-class.Rd
man/MultiAssayExperiment-helpers.Rd
man/MultiAssayExperiment-methods.Rd
man/MultiAssayExperiment-package.Rd
man/MultiAssayExperiment.Rd
man/MultiAssayExperimentToMAF.Rd
man/hasAssay.Rd
man/mapToList.Rd
man/miniACC.Rd
man/prepMultiAssay.Rd
man/reexports.Rd
man/subsetBy.Rd
man/upsetSamples.Rd
tests/testthat.R
tests/testthat/test-ExperimentList-class.R
tests/testthat/test-Formats.R
tests/testthat/test-MultiAssayExperiment-class.R
tests/testthat/test-MultiAssayExperiment-helpers.R
tests/testthat/test-MultiAssayExperiment.R
tests/testthat/test-assay-methods.R
tests/testthat/test-colnameOrder.R
tests/testthat/test-combine.R
tests/testthat/test-constructors.R
tests/testthat/test-drop.R
tests/testthat/test-emptybuilders.R
tests/testthat/test-listToMap.R
tests/testthat/test-mergeReps.R
tests/testthat/test-methods.R
tests/testthat/test-row-col-order.R
tests/testthat/test-rowcolnames.R
tests/testthat/test-saveHDF5MultiAssayExperiment.R
tests/testthat/test-subset.R
vignettes/.install_extras
vignettes/MultiAssayExperiment.Rmd
vignettes/MultiAssayExperiment.png
vignettes/MultiAssayExperiment_cheatsheet.pdf
vignettes/MultiAssayExperiment_cheatsheet.pdf.asis
vignettes/QuickStartMultiAssay.Rmd
vignettes/UsingHDF5Array.Rmd
vignettes/extras/Fig1a.R
vignettes/extras/Fig1b.R
vignettes/extras/MAE-curatedMetagenomicData.Rmd
