waldronlab/doppelgangR: Identify likely duplicate samples from genomic or meta-data
The main function is doppelgangR(), which takes as minimal input a list of ExpressionSet object, and searches all list pairs for duplicated samples. The search is based on the genomic data (exprs(eset)), phenotype/clinical data (pData(eset)), and "smoking guns" - supposedly unique identifiers found in pData(eset).
Getting started
Browse package contents
Package details |
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| Bioconductor views | GeneExpression ImmunoOncology Microarray QualityControl RNASeq |
| Maintainer | |
| License | GPL (>=2.0) |
| Version | 1.35.0 |
| URL | https://github.com/lwaldron/doppelgangR |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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