Man pages for wdl2459/ConQuR
Batch Effects Removal for Microbiome Data in Large-Scale Epidemiology Studies via Conditional Quantile Regression
| ConQuR | Remove batch effects from a taxa read count table |
| ConQuR_libsize | Remove batch effects from a taxa read count table (library... |
| PERMANOVA_R2 | PERMANOVA R2 of batch and variable of interest |
| Plot_PCoA | Stratified PCoA plots |
| RF_Pred | Predict binary variables based on a taxa read count table by... |
| RF_Pred_Multiclass | Predict multiclass variables based on a taxa read count table... |
| RF_Pred_Regression | Predict continuous variables based on a taxa read count table... |
| Sample_Data | Example data, a taxa read count table, with batchid, key... |
| Tune_ConQuR | Tune over variations of ConQuR |
| Tune_ConQuR_libsize | Tune over variations of ConQuR_libsize |
