Man pages for weecology/NeonTreeEvaluation_package
Evaluate Individual Tree Segmentation Algorithms against Benchmark Data
| assign_trees | Find matches between predicted and ground truth tree based on... |
| boxes_to_spatial_polygons | Convert xml crown annotations into projected bounding boxes.... |
| calc_jaccard | Collect jaccard statistic for ground truth and prediction... |
| canopy_model | Canopy model generation from normalized las |
| check_download | Check if data has been downloaded |
| compute_precision_recall | Compute precision and recall statistics between predicted... |
| crown_polygons | Field-annotated Crowns |
| download | Download sensor and annotation data for the... |
| evaluate_field_crowns | Compute evaluation metrics for the field-collected crowns |
| evaluate_field_stems | Compute evaluation scores for the field collected stem data |
| evaluate_image_crowns | Compute evaluation metrics for the hand-annotated images |
| extract_coordinates | Extract bounding box coordinates from SpatialPolygons object |
| field | NEON Woody Vegetation Structure |
| field_crowns | Compute evaluation statistics for one plot of field-annotated... |
| get_data | Retrieve sensor or annotation data from package contents |
| grand_summary | Summary statistics for evaluated crowns |
| image_crowns | Compute evaluation statistics for one plot |
| IoU | Intersection-over-union of two polygons |
| list_annotations | List paths to annotations |
| list_chm | List paths to canopy height files |
| list_field_crowns | List images that overlap with field-annotation crowns |
| list_field_stems | List images that overlap with field-collected stems |
| list_rgb | List paths to RGB files |
| load_field_crown | Load and overlay ground truth annotations for single plot... |
| load_ground_truth | Load and overlay ground truth annotations for single plot... |
| polygon_overlap | Find area of overlap among sets of polygons |
| polygon_overlap_all | Find area of overlap among all sets of polygons |
| PR | Precision and recall for a set of prediction results |
| project | Project boxes from image coordinates into utm In order to... |
| readTreeXML | Read tree annotations for a NEON site from a set of XML files |
| site_summary | Site summary table for image-evaluated crowns |
| submission | Example NeonTreeEvaluation submission |
| xml_parse | Parse crown annotations from an Pascal VOC XML file |
| zenodo_url | Obtain the URL for a Zenodo record to be downloaded |
