Man pages for wfinsinger/tapas
Trend And PeAkS analysis in paleo-ecological time series
| arco | Screen peaks when input data is charcoal areas |
| br_data | Sedimentary charcoal data (Lake Brazi) |
| br_sdl | Sedimentary charcoal-particle data (Lake Brazi) |
| check_pretreat | Check the input data |
| co_char_data | Sedimentary charcoal data (Code Lake) |
| cpts_ar | Identifying changes in mean and variance of accumulation-rate... |
| get_overlap_depths | Get overlapping sample depths |
| global_thresh | Determine threshold values to extract signal from a detrended... |
| local_thresh | Decompose a detrended timeseries into _noise_ and _signal_. |
| mgcv2tapas | Import a trend determined by GAM into tapas |
| peak_detection | Performs peak-detection analysis of a time series. |
| Plot.Anomalies | Plots a summary figure of results obtained with 'tapas'. |
| plot_ar_i | Plot to compare re-sampled and non-resampled accumulation... |
| plot_raw | Plots the raw input data as a polygon and optionally also bar... |
| Plot_ReturnIntervals | Plot return intervals determined based on the Trend And Peaks... |
| pretreatment | Calculate re-sampled particles' accumulation rates for... |
| pretreatment_data | Pre-process data by re-sampling all columns. |
| rand_peaks | A random series with peaks that are proportional to... |
| read_imagej_results | Reads results of charcoal analyses made with ImageJ |
| red_noise | A random series with no peaks, only red noise |
| SeriesDetrend | Detrend time series. |
| SNI | Calculate signal-to-noise index (SNI) for paleoecological... |
| tapas2mgcv | Extract data from a pretreatment_data() list to determine... |
| tapas_export | Prepares an output data frame to summarize the results of the... |
