Files in wiesenfa/challengeR

Analyzing assessment data of biomedical image analysis competitions and visualization of results

R/Aggregate.R R/Bootstrap.R R/Rank.R R/Rank.aggregated.list.R R/S3.R R/aaggregate.R R/benchmarkUtils.R R/boxplot.R R/by.R R/challengeR.R R/compareRanks.R R/consensus.R R/default_colors.R R/dendrogram.R R/extract.workflow.R R/firstlib.R R/graph.R R/melt.R R/merge.list.R R/methodsplot.R R/podium.R R/rankNA2.R R/rankingHeatmap.R R/rankingMethods.R R/relation.R R/report.R R/rrank.R R/select.R R/significanceMap.R R/stability.R R/subset.R R/testBased.R R/violin.R R/winner.R README.md Readme.Rmd inst/appdir/characterizationOfAlgorithmsBootstrapping.Rmd inst/appdir/characterizationOfTasksBootstrapping.Rmd inst/appdir/consensusRanking.Rmd inst/appdir/overviewMultiTaskBootstrapping.Rmd inst/appdir/overviewMultiTaskNoBootstrapping.Rmd inst/appdir/overviewSingleTaskBootstrapping.Rmd inst/appdir/overviewSingleTaskNoBootstrapping.Rmd inst/appdir/report.Rmd inst/appdir/visualizationAcrossTasks.Rmd inst/appdir/visualizationBlobPlots.Rmd inst/appdir/visualizationViolinPlots.Rmd man/aggregate.challenge.Rd man/aggregateThenRank.Rd man/as.challenge.Rd man/bootstrap.ranked.list.Rd man/boxplot.ranked.list.Rd man/consensus.ranked.list.Rd man/dendrogram.ranked.list.Rd man/methodsplot.challenge.Rd man/podium.challenge.Rd man/podium.ranked.list.Rd man/rankThenAggregate.Rd man/rankingHeatmap.challenge.Rd man/rankingHeatmap.ranked.list.Rd man/report.bootstrap.list.Rd man/report.ranked.list.Rd man/significanceMap.ranked.list.Rd man/stability.ranked.list.Rd man/stabilityByAlgorithm.bootstrap.list.Rd man/stabilityByTask.bootstrap.list.Rd man/subset.bootstrap.list.Rd man/subset.ranked.list.Rd man/testThenRank.Rd man/violin.bootstrap.list.Rd tests/testthat.R tests/testthat/test-aggregateThenRank.R tests/testthat/test-blobPlotStabilityAcrossTasks.R tests/testthat/test-blobPlotStabilityByAlgorithm.R tests/testthat/test-blobPlotStabilityByTask.R tests/testthat/test-bootstrap.R tests/testthat/test-boxplot.R tests/testthat/test-challenge.R tests/testthat/test-linePlot.R tests/testthat/test-networkPlot.R tests/testthat/test-rankThenAggregate.R tests/testthat/test-rankingHeatmap.R tests/testthat/test-report.R tests/testthat/test-significanceMap.R tests/testthat/test-stackedBarPlotStabilityByAlgorithm.R tests/testthat/test-stackedFrequencyPlotStabilityByAlgorithm.R tests/testthat/test-subset.R tests/testthat/test-taskSubset.R tests/testthat/test-testThenRank.R tests/testthat/test-violinPlot.R vignettes/MultiTask_rank-then-aggregate.R vignettes/MultiTask_test-then-rank.R vignettes/SingleTask_aggregate-then-rank.R vignettes/quickstart.Rmd vignettes/visualizations.Rmd