Man pages for yuabrahamliu/scDeconv
scDeconv is an R Package to Deconvolve Bulk DNA Methylation Data with scRNA-seq Data in a Multi-omics Manner.
| celldeconvplots | Draw box plot and heatmaps for cell deconvolution result |
| celldiff | Find cell type specific differential features from bulk data |
| cellscatterplots | Draw scatter plots to compare two sets of cell content values |
| enrichwrapper | Annotate the function of the cell-type-specific differential... |
| epDeconv | Deconvolve bulk DNA methylation data using RNA reference |
| methylpredict | Predict cell contents for new methylation data using an... |
| prepseudobulk | Synthesize pseudo-bulk RNA-seq data from scRNA-seq data |
| probetogene | Summarize the methylation beta values of probes to genes |
| refDeconv | Deconvolve cell contents using reference from the same omics |
| scDeconv | Deconvolve bulk RNA data using scRNA-seq data |
| scRef | Make cell deconvolution reference from scRNA-seq data |
