| BMfinder | Discover bimodal distrubition features | 
| getDepth | Get Read Depth | 
| getGeneinfo | Get Gene Informaton from a ballgown object | 
| rice.bg | Rice ballgown object | 
| spliceGene | Calculate Splicing Scores for One Gene | 
| spliceGenome | Calculate Genome-wide Splicing Scores | 
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