Files in yuhuihui2011/vasp_test
Quantification and Visulization of Variations of Splicing in Population
.gitignore
DESCRIPTION
NAMESPACE
NEWS
R/BMfinder.R
R/data.R
R/getDepth.R
R/getGeneinfo.R
R/spliceGene.R
R/spliceGenome.R
R/splicePlot.R
README.md
data/rice.bg.RData
figure/plotBedgraph-1.png
figure/plotGenes-1.png
figure/splicePlot-1.png
figure/unnamed-chunk-10-1.png
figure/unnamed-chunk-9-1.png
figure/unnamed-chunk-9-2.png
inst/extdata/Sample_027.bam
inst/extdata/Sample_027.bam.bai
inst/extdata/Sample_027/Sample_027.gtf
inst/extdata/Sample_027/e2t.ctab
inst/extdata/Sample_027/e_data.ctab
inst/extdata/Sample_027/i2t.ctab
inst/extdata/Sample_027/i_data.ctab
inst/extdata/Sample_027/t_data.ctab
inst/extdata/Sample_042/Sample_042.gtf
inst/extdata/Sample_042/e2t.ctab
inst/extdata/Sample_042/e_data.ctab
inst/extdata/Sample_042/i2t.ctab
inst/extdata/Sample_042/i_data.ctab
inst/extdata/Sample_042/t_data.ctab
inst/extdata/Sample_102.bam
inst/extdata/Sample_102.bam.bai
inst/extdata/Sample_102/Sample_102.gtf
inst/extdata/Sample_102/e2t.ctab
inst/extdata/Sample_102/e_data.ctab
inst/extdata/Sample_102/i2t.ctab
inst/extdata/Sample_102/i_data.ctab
inst/extdata/Sample_102/t_data.ctab
inst/extdata/Sample_137/Sample_137.gtf
inst/extdata/Sample_137/e2t.ctab
inst/extdata/Sample_137/e_data.ctab
inst/extdata/Sample_137/i2t.ctab
inst/extdata/Sample_137/i_data.ctab
inst/extdata/Sample_137/t_data.ctab
inst/extdata/Sample_237.bam
inst/extdata/Sample_237.bam.bai
inst/extdata/Sample_237/Sample_237.gtf
inst/extdata/Sample_237/e2t.ctab
inst/extdata/Sample_237/e_data.ctab
inst/extdata/Sample_237/i2t.ctab
inst/extdata/Sample_237/i_data.ctab
inst/extdata/Sample_237/t_data.ctab
inst/extdata/Sample_272/Sample_272.gtf
inst/extdata/Sample_272/e2t.ctab
inst/extdata/Sample_272/e_data.ctab
inst/extdata/Sample_272/i2t.ctab
inst/extdata/Sample_272/i_data.ctab
inst/extdata/Sample_272/t_data.ctab
inst/extdata/genes.gtf
man/BMfinder.Rd
man/getDepth.Rd
man/getGeneinfo.Rd
man/rice.bg.Rd
man/spliceGene.Rd
man/spliceGenome.Rd
man/splicePlot.Rd
vignettes/vasp.Rmd
vignettes/vasp.md
