Files in zhimeir/adaptiveKnockoffs
Implementing knockoffs with side information.
.DS_Store
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/adaptive_knockoff.R
R/filter_EM.R
R/filter_bEM.R
R/filter_gam.R
R/filter_gam_alpha.R
R/filter_glm.R
R/filter_glmnet.R
R/filter_randomForest.R
R/generic_getorder.R
R/plot_ordering.R
R/plot_rank.R
R/plot_vanilla.R
README.md
adaptiveKnockoff.Rproj
docs/.RData
docs/.Rhistory
docs/.Rproj.user/C93154F3/console06/B72851C5
docs/.Rproj.user/C93154F3/console06/INDEX001
docs/.Rproj.user/C93154F3/pcs/files-pane.pper
docs/.Rproj.user/C93154F3/pcs/source-pane.pper
docs/.Rproj.user/C93154F3/pcs/windowlayoutstate.pper
docs/.Rproj.user/C93154F3/pcs/workbench-pane.pper
docs/.Rproj.user/C93154F3/rmd-outputs
docs/.Rproj.user/C93154F3/saved_source_markers
docs/.Rproj.user/C93154F3/sources/per/t/690D56A9
docs/.Rproj.user/C93154F3/sources/per/t/690D56A9-contents
docs/.Rproj.user/C93154F3/sources/per/t/6B7280DF
docs/.Rproj.user/C93154F3/sources/per/t/6B7280DF-contents
docs/.Rproj.user/C93154F3/sources/prop/2D1ED273
docs/.Rproj.user/C93154F3/sources/prop/5DE49F10
docs/.Rproj.user/C93154F3/sources/prop/5DFA40A0
docs/.Rproj.user/C93154F3/sources/prop/DE18667F
docs/.Rproj.user/C93154F3/sources/prop/INDEX
docs/.Rproj.user/shared/notebooks/6FDE7E37-index/1/C93154F357F6F44B/chunks.json
docs/.Rproj.user/shared/notebooks/6FDE7E37-index/1/C93154F3A0018E2B/chunks.json
docs/.Rproj.user/shared/notebooks/6FDE7E37-index/1/s/chunks.json
docs/.Rproj.user/shared/notebooks/E51348EB-tutorial1/1/C93154F3A0018E2B/chunks.json
docs/.Rproj.user/shared/notebooks/E51348EB-tutorial1/1/s/chunks.json
docs/.Rproj.user/shared/notebooks/E51348EB-tutorial1/1/s/csetup_chunk/000002.csv
docs/.Rproj.user/shared/notebooks/E51348EB-tutorial1/1/s/cyvxyqohiduw2/000004.csv
docs/.Rproj.user/shared/notebooks/E51348EB-tutorial1/1/s/cyvxyqohiduw2/000005.error
docs/.Rproj.user/shared/notebooks/patch-chunk-names
docs/.Rproj.user/shared/notebooks/paths
docs/README.html
docs/README.md
docs/_site.R
docs/_site.yml
docs/index.Rmd
docs/index.html
docs/rmarkdown-website-tutorial.Rproj
docs/site_libs/bootstrap-3.3.5/css/bootstrap-theme.css
docs/site_libs/bootstrap-3.3.5/css/bootstrap-theme.css.map
docs/site_libs/bootstrap-3.3.5/css/bootstrap-theme.min.css
docs/site_libs/bootstrap-3.3.5/css/bootstrap.css
docs/site_libs/bootstrap-3.3.5/css/bootstrap.css.map
docs/site_libs/bootstrap-3.3.5/css/bootstrap.min.css
docs/site_libs/bootstrap-3.3.5/css/cerulean.min.css
docs/site_libs/bootstrap-3.3.5/css/cosmo.min.css
docs/site_libs/bootstrap-3.3.5/css/darkly.min.css
docs/site_libs/bootstrap-3.3.5/css/flatly.min.css
docs/site_libs/bootstrap-3.3.5/css/fonts/Lato.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/LatoBold.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/LatoItalic.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/NewsCycle.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/NewsCycleBold.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/OpenSans.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/OpenSansBold.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/OpenSansBoldItalic.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/OpenSansItalic.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/OpenSansLight.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/OpenSansLightItalic.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/Raleway.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/RalewayBold.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/Roboto.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/RobotoBold.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/RobotoLight.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/RobotoMedium.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/SourceSansPro.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/SourceSansProBold.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/SourceSansProItalic.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/SourceSansProLight.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/Ubuntu.ttf
docs/site_libs/bootstrap-3.3.5/css/journal.min.css
docs/site_libs/bootstrap-3.3.5/css/lumen.min.css
docs/site_libs/bootstrap-3.3.5/css/paper.min.css
docs/site_libs/bootstrap-3.3.5/css/readable.min.css
docs/site_libs/bootstrap-3.3.5/css/sandstone.min.css
docs/site_libs/bootstrap-3.3.5/css/simplex.min.css
docs/site_libs/bootstrap-3.3.5/css/spacelab.min.css
docs/site_libs/bootstrap-3.3.5/css/united.min.css
docs/site_libs/bootstrap-3.3.5/css/yeti.min.css
docs/site_libs/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.eot
docs/site_libs/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.svg
docs/site_libs/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.ttf
docs/site_libs/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.woff
docs/site_libs/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.woff2
docs/site_libs/bootstrap-3.3.5/js/bootstrap.js
docs/site_libs/bootstrap-3.3.5/js/bootstrap.min.js
docs/site_libs/bootstrap-3.3.5/js/npm.js
docs/site_libs/bootstrap-3.3.5/shim/html5shiv.min.js
docs/site_libs/bootstrap-3.3.5/shim/respond.min.js
docs/site_libs/highlight/default.css
docs/site_libs/highlight/highlight.js
docs/site_libs/highlight/textmate.css
docs/site_libs/highlightjs-1.1/default.css
docs/site_libs/highlightjs-1.1/highlight.js
docs/site_libs/highlightjs-1.1/textmate.css
docs/site_libs/highlightjs-9.12.0/default.css
docs/site_libs/highlightjs-9.12.0/highlight.js
docs/site_libs/highlightjs-9.12.0/textmate.css
docs/site_libs/jquery-1.11.3/jquery.min.js
docs/site_libs/jqueryui-1.11.4/README
docs/site_libs/jqueryui-1.11.4/images/ui-icons_444444_256x240.png
docs/site_libs/jqueryui-1.11.4/images/ui-icons_555555_256x240.png
docs/site_libs/jqueryui-1.11.4/images/ui-icons_777620_256x240.png
docs/site_libs/jqueryui-1.11.4/images/ui-icons_777777_256x240.png
docs/site_libs/jqueryui-1.11.4/images/ui-icons_cc0000_256x240.png
docs/site_libs/jqueryui-1.11.4/images/ui-icons_ffffff_256x240.png
docs/site_libs/jqueryui-1.11.4/index.html
docs/site_libs/jqueryui-1.11.4/jquery-ui.css
docs/site_libs/jqueryui-1.11.4/jquery-ui.js
docs/site_libs/jqueryui-1.11.4/jquery-ui.min.css
docs/site_libs/jqueryui-1.11.4/jquery-ui.min.js
docs/site_libs/jqueryui-1.11.4/jquery-ui.structure.css
docs/site_libs/jqueryui-1.11.4/jquery-ui.structure.min.css
docs/site_libs/jqueryui-1.11.4/jquery-ui.theme.css
docs/site_libs/jqueryui-1.11.4/jquery-ui.theme.min.css
docs/site_libs/navigation-1.1/codefolding.js
docs/site_libs/navigation-1.1/sourceembed.js
docs/site_libs/navigation-1.1/tabsets.js
docs/site_libs/tocify-1.9.1/jquery.tocify.css
docs/site_libs/tocify-1.9.1/jquery.tocify.js
docs/tutorial1.Rmd
docs/tutorial1.html
docs/tutorial1_files/figure-html/fig1-1.png
docs/tutorial1_files/figure-html/fig2-1.png
docs/tutorial1_files/figure-html/fig3-1.png
man/adaptive_knockoff.Rd
man/calculate.fdphat.Rd
man/filter_EM.Rd
man/filter_gam.Rd
man/filter_glm.Rd
man/filter_glmnet.Rd
man/filter_randomForest.Rd
man/filter_randomForest_getorder.Rd
man/plot_ordering.Rd
man/plot_rank.Rd
man/plot_vanilla.Rd
vignettes/generic_tutorial.html
