addInpatients: Add Inpatient and ICU Hospitalization Metrics to a Cohort
In CohortUtilisation: Healthcare Resource Utilization on OMOP CDM Cohorts

addInpatients

R Documentation

Add Inpatient and ICU Hospitalization Metrics to a Cohort

Description

Add Inpatient and ICU Hospitalization Metrics to a Cohort

Usage

addInpatients(
  x,
  indexDate = "cohort_start_date",
  censorDate = NULL,
  window = list(c(-365, -1), c(0, 365)),
  visitConceptIds = c(9201L, 8717L, 581379L),
  icuConceptIds = 32037L,
  icuSpecialtyConceptIds = c(38004500L),
  stratifySpecialty = FALSE,
  specialties = NULL,
  readmissions = FALSE,
  nameStyle = "{domain}_{metric}_{window_name}",
  name = NULL
)

addHospitalizations(
  x,
  indexDate = "cohort_start_date",
  censorDate = NULL,
  window = list(c(-365, -1), c(0, 365)),
  visitConceptIds = c(9201L, 8717L, 581379L),
  icuConceptIds = 32037L,
  icuSpecialtyConceptIds = c(38004500L),
  stratifySpecialty = FALSE,
  specialties = NULL,
  readmissions = FALSE,
  nameStyle = "{domain}_{metric}_{window_name}",
  name = NULL
)

addInpatient(
  x,
  indexDate = "cohort_start_date",
  censorDate = NULL,
  window = list(c(-365, -1), c(0, 365)),
  visitConceptIds = c(9201L, 8717L, 581379L),
  icuConceptIds = 32037L,
  icuSpecialtyConceptIds = c(38004500L),
  stratifySpecialty = FALSE,
  specialties = NULL,
  readmissions = FALSE,
  nameStyle = "{domain}_{metric}_{window_name}",
  name = NULL
)

Arguments

`x`	A cohort table or cdm_table.
`indexDate`	Date variable in `x` anchoring the observation window. Default: `"cohort_start_date"`.
`censorDate`	Optional date variable in `x` to censor observation.
`window`	A named or unnamed list of 2-element numeric vectors. Default: `list(c(-365, -1), c(0, 365))`.
`visitConceptIds`	OMOP visit concept IDs for general inpatient stays. Default: `c(9201L, 8717L, 581379L)`.
`icuConceptIds`	OMOP visit concept IDs for ICU stays. Default: `32037L`.
`icuSpecialtyConceptIds`	OMOP provider specialty concept IDs for ICU stays. Default: `c(38004500L)`.
`stratifySpecialty`	Logical; whether to compute specialty breakdown. Default: `FALSE`.
`specialties`	Optional named list of integer vectors of OMOP specialty concept IDs for granular specialty breakdown. Default: `NULL`.
`readmissions`	Logical; whether to compute 30-day and 90-day readmissions. Default: `FALSE`.
`nameStyle`	Column naming pattern. Default: `"{domain}_{metric}_{window_name}"`.
`name`	Name of the new table in the write schema. If NULL, a temporary table is returned.