Description Usage Arguments Value References Examples
This function performs differential expression analysis based on negative binomial additive model.
1 2 |
object |
a NBAMSeqDataSet object |
gamma |
a number greater or equal to 1. Increase gamma to create
smoother models. Default gamma is 2.5. See |
parallel |
either TRUE or FALSE indicating whether parallel should be used. Default is FALSE |
fitlin |
either TRUE or FALSE indicating whether linear model should be fitted. Default is FALSE |
BPPARAM |
an argument provided to |
... |
additional arguments provided to |
a NBAMSeqDataSet object
Love, M.I., Huber, W., Anders, S. (2014) Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biology, 15:550. https://doi.org/10.1186/s13059-014-0550-8
1 2 | gsd = makeExample(n = 3, m = 10)
gsd = NBAMSeq(gsd)
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.