View source: R/cocor.dep.groups.overlap.r
cocor.dep.groups.overlap | R Documentation |
Performs a test of significance for the difference between two correlations based on dependent groups (e.g.,
the same group). The two correlations are overlapping, i.e.,
they have one variable in common. The comparison is made between r.jk
and r.jh
. The function tests whether the correlations between j
and k
(r.jk
) and between j
and h
(r.jh
) differ in magnitude. Because the significance depends on the intercorrelation between k
and h
(r.kh),
this intercorrelation has to be provided as an additional parameter. The function expects correlation coefficients as input.
cocor.dep.groups.overlap( r.jk, r.jh, r.kh, n, alternative = "two.sided", test = "all", alpha = 0.05, conf.level = 0.95, null.value = 0, data.name = NULL, var.labels = NULL, return.htest = FALSE )
r.jk |
A number specifying the correlation between j and k (this correlation is used for comparison) |
r.jh |
A number specifying the correlation between j and h (this correlation is used for comparison) |
r.kh |
A number specifying the correlation between k and h |
n |
An integer defining the size of the group |
alternative |
A character string specifying whether the alternative hypothesis is two-sided (" |
test |
A vector of character strings specifying the tests to be used ( |
alpha |
A number defining the alpha level for the hypothesis test. The default value is .05. |
conf.level |
A number defining the level of confidence for the confidence interval (if test |
null.value |
A number defining the hypothesized difference between the two correlations used for testing the null hypothesis. The default value is 0. If the value is other than 0,
only the test |
data.name |
A character string giving the name of the data/group. |
var.labels |
A vector of three character strings specifying the labels for j, k, and h (in this order). |
return.htest |
A logical indicating whether the result should be returned as a list containing a list of class 'htest' for each test. The default value is |
Returns an S4 object of class 'cocor.dep.groups.overlap' with the following slots:
r.jk |
Input parameter |
r.jh |
Input parameter |
r.kh |
Input parameter |
n |
Input parameter |
alternative |
Input parameter |
alpha |
Input parameter |
conf.level |
Input parameter |
null.value |
Input parameter |
data.name |
Input parameter |
var.labels |
Input parameter |
diff |
Difference between the two correlations, r.jk and r.jh, that were compared |
For each test a slot of the same name exists with a list containing the following elements:
statistic |
The value of the test statistic (unless test |
distribution |
The distribution of the test statistic (unless test |
df |
The degrees of freedom of the distribution of the test statistic (if test |
p.value |
The p-value of the test (unless test |
conf.int |
The confidence interval of the difference between the two correlations (if test |
In the following, r_{jk} and r_{jh} are the two correlations that are being compared; Z_{jk} and Z_{jh} are their Z transformed equivalents. r_{kh} is the related correlation that is additionally required. n specifies the size of the group the two correlations are based on. Some tests make use of Fisher's r-to-Z transformation (1921, p. 26):
Z = (1/2)(ln(1+r) - ln(1-r)).
Pearson and Filon's (1898) z
This test was proposed by Pearson and Filon (1898, p. 259, formula xxxvii). The test statistic z is computed as
z = (√(n) (r_{jk} - r_{jh}))/(√((1 - r_{jk}^2)^2 + (1 - r_{jh}^2)^2 - 2k))
(Steiger, 1980, p. 246, formula 4), where
k = r_{kh}(1 - r_{jk}^2 - r_{jh}^2) - (1/2)(r_{jk}r_{jh})(1 - r_{jk}^2 - r_{jh}^2 - r_{kh}^2)
(Steiger, 1980, p. 245 formula 3).
Hotelling's (1940) t
The test statistic t is given by
t = ((r_{jk} - r_{jh})√((n - 3)(1 + r_{kh})))/(√(2|R|))
(Hotelling, 1940, p. 278, formula 7) with df = n - 3, where
|R| = 1 + 2 r_{jk} r_{jh} r_{kh} - r_{jk}^2 - r_{jh}^2 - r_{kh}^2
(Hotelling, 1940, p. 278). The test statistic is also given in Steiger (1980, p. 246), Glass and Stanley (1984, p. 311, formula 15.7), and Hittner, May, and Silver (2003, p. 152).
Williams' (1959) t
This test is a modification of Hotelling's (1940) t and was suggested by Williams (1959). Two mathematically different formulae for Williams' t can be found in the literature (Hittner et al., 2003, p. 152). This is the version that Hittner et al. (2003, p. 152) labeled as "standard Williams' t":
t = (r_{jk} - r_{jh})√(((n - 1)(1 + r_{kh}))/(2((n - 1)/(n - 3))|R|+\bar{r}^2(1 - r_{kh})^3))
with df = n - 3, where
\bar{r} = (r_{jk} + r_{jh})/2
and
|R| = 1 + 2 r_{jk} r_{jh} r_{kh} - r_{jk}^2 - r_{jh}^2 - r_{kh}^2.
An alternative formula for Williams' t—termed as "Williams' modified t per Hendrickson,
Stanley, and Hills (1970)" by Hittner et al. (2003,
p. 152)—is implemented in this function as hendrickson1970
(see below).
The test statistic of williams1959
is also given in Steiger (1980, p. 246,
formula 7) and Neill and Dunn (1975, p. 533).
Results of williams1959
are in accordance with the results of the software DEPCORR by Hittner and May (1998) and DEPCOR by Silver,
Hittner, and May (2006).
However,
we found several typographical errors in formulae that also claim to compute Williams' t.
For example, the formula reported by Boyer, Palachek, and Schucany (1983,
p. 76) contains an error because the term (1 - r_{rk}) is not being cubed.
There are also typographical errors in the formula described by Hittner et al. (2003,
p. 152). For example,
r_{jk} - r_{jh} is divided instead of being multiplied by the square root term, and in the denominator of the fraction in the square root term,
there are additional parentheses so that the whole denominator is multiplied by 2.
These same errors can also be found in Wilcox and Tian (2008, p. 107, formula 1).
Olkin's (1967) z
In the original article by Olkin (1967, p. 112) and in Hendrickson, Stanley, and Hills (1970, p. 190, formula 2), the reported formula contains a typographical error. Hendrickson and Collins (1970, p. 639) provide a corrected version. In the revised version, however, n in the enumerator is decreased by 1. This function implements the corrected formula without the decrement. The formula implemented in this function is used by Glass and Stanley (1970, p. 313, formula 14.19), Hittner et al. (2003, p. 152), and May and Hittner (1997a, p. 259; 1997b, p. 480):
z = ((r_{jk} - r_{jh})√(n))/(√((1 - r_{jk}^2)^2 + (1 - r_{jh}^2)^2 - 2 r_{kh}^3 - (2 r_{kh} - r_{jk} r_{jh}) (1 - r_{kh}^2 - r_{jk}^2 - r_{jh}^2))).
Dunn and Clark's (1969) z
The test statistic z of this test is calculated as
z = ((Z_{jk} - Z_{jh})√(n - 3))/(√(2 - 2c))
(Dunn and Clark, 1969, p. 370, formula 15), where
c = (r_{kh}(1 - r_{jk}^2 - r_{jh}^2) - (1/2) r_{jk} r_{jh} (1 - r_{jk}^2 - r_{jh}^2 - r_{kh}^2))/((1 - r_{jk}^2)(1 - r_{jh}^2))
(Dunn and Clark, 1969, p. 368, formula 8).
Hendrickson, Stanley, and Hills' (1970) modification of Williams' (1959) t
This test is a modification of Hotelling's (1940) t and was suggested by Williams (1959).
Two mathematically different formulae of Williams' (1959) t can be found in the literature.
hendrickson1970
is the version that Hittner et al. (2003,
p. 152) labeled as "Williams' modified t per Hendrickson, Stanley, and Hills (1970)".
An alternative formula termed as "standard Williams' t" by Hittner et al. (2003,
p. 152) is implemented as williams1959
(see above).
The hendrickson1970
formula can be found in Hendrickson, Stanley, and Hills (1970,
p. 193), May and Hittner (1997a, p. 259; 1997b, p. 480), and Hittner et al. (2003,
p. 152):
t = ((r_{jk} - r_{jh})√((n - 3)(1 + r_{kh})))/(√(2|R|+\((r_{jk} - r_{jh})^2(1 - r_{kh})^3)/(4(n - 1))))
with df = n - 3. A slightly changed version of this formula was provided by Dunn and Clark (1971, p. 905, formula 1.2), but seems to be erroneous, due to an error in the denominator.
Steiger's (1980) modification of Dunn and Clark's (1969) z using average correlations
This test was proposed by Steiger (1980) and is a modification of Dunn and Clark's (1969) z. Instead of r_{jk} and r_{jh}, the mean of the two is used. The test statistic z is defined as
z = ((Z_{jk} - Z_{jh})√(n - 3))/(√(2 - 2c))
(Steiger 1980, p. 247, formula 14), where
\bar{r} = (r_{jk} + r_{jh})/2
(Steiger, 1980, p. 247) and
c = (r_{kh}(1 - 2\bar{r}^2) - (1/2)\bar{r}^2(1 - 2\bar{r}^2 - r_{kh}^2))/((1 - \bar{r}^2)^2)
(Steiger ,1980, p. 247, formula 10; in the original article, there are brackets missing around the divisor).
Meng, Rosenthal, and Rubin's (1992) z
This test is based on the test statistic z,
z = (Z_{jk} - Z_{jh}) √((n - 3)/(2(1 - r_{kh})h),
(Meng et al., 1992, p. 173, formula 1), where
h = (1 - f\overline{r^2})/(1 - \overline{r^2})
(Meng et al., 1992, p. 173, formula 2),
f = (1 - r_{kh})/(2(1 - \overline{r^2}))
(f must be ≤ 1; Meng et al., 1992, p. 173, formula 3), and
\overline{r^2} = (r_{jk}^2 + r_{jh}^2)/2
(Meng et al., 1992, p. 173). This test also constructs a confidence interval of the difference between the two correlation coefficients r_{jk} and r_{jh}:
L, U = Z_{jk} - Z_{jk} +- z_{α/2} √((2(1 - r_{kh})h)/(n - 3))
(Meng et al., 1992, p. 173, formula 4). α denotes the desired alpha level of the confidence interval. If the confidence interval includes zero, the null hypothesis that the two correlations are equal must be retained. If zero is outside the confidence interval, the null hypothesis can be rejected.
Hittner, May, and Silver's (2003) modification of Dunn and Clark's (1969) z using a backtransformed average Fisher's (1921) Z procedure
The approach to backtransform averaged Fisher's (1921) Zs was first proposed by Silver and Dunlap (1987) and was applied to the comparison of overlapping correlations by Hittner et al. (2003). The test is based on Steiger's (1980) approach. The test statistic z is calculated as
z = ((Z_{jk} - Z_{jh})√(n - 3))/(√(2 - 2c))
(Hittner et al., 2003, p. 153), where
c = (r_{kh}(1 - 2\bar{r}_z^2) - (1/2)\bar{r}_z^2(1 - 2\bar{r}_z^2 - r_{kh}^2))/((1 - \bar{r}_z^2)^2)
(Hittner et al., 2003, p. 153),
\bar{r}_z = (exp(2\bar{Z} - 1))/(exp(2\bar{Z} + 1))
(Silver and Dunlap, 1987, p. 146, formula 4), and
\bar{Z} = (Z_{jk} + Z_{jh})/2
(Silver and Dunlap, 1987, p. 146).
Zou's (2007) confidence interval
This test calculates the confidence interval of the difference between the two correlation coefficients r_{jk} and r_{jh}. If the confidence interval includes zero, the null hypothesis that the two correlations are equal must be retained. If the confidence interval does not include zero, the null hypothesis has to be rejected. A lower and upper bound for the interval (L and U, respectively) is given by
L = r_{jk} - r_{jh} - √((r_{jk} - l_1)^2 + (u_2 - r_{jh})^2 - 2c(r_{jk} - l_1)(u_2 - r_{jh}))
and
U = r_{jk} - r_{jh} + √((u_1 - r_{jk})^2 + (r_{jh} - l_2)^2 - 2c(u_1 - r_{jk})(r_{jh} - l_2))
(Zou, 2007, p. 409), where
l = (exp(2l') - 1)/(exp(2l') + 1),
u = (exp(2u') - 1)/(exp(2u') + 1)
(Zou, 2007, p. 406),
c = ((r_{kh} - (1/2) r_{jk} r_{jh})(1 - r_{jk}^2- r_{jh}^2- r_{kh}^2) + r_{kh}^3)/((1 - r_{jk}^2)(1 - r_{jh}^2))
(Zou, 2007, p. 409), and
l', u' = Z +- z_{α/2} √(1/(n - 3))
(Zou, 2007, p. 406). α denotes the desired alpha level of the confidence interval.
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cocor, cocor.indep.groups, cocor.dep.groups.nonoverlap, as.htest
# Compare the difference between the correlations (age, intelligence) and # (age, shoe size) measured in the same group (all values are fictional): r.jk <- .2 # Correlation (age, intelligence) r.jh <- .5 # Correlation (age, shoe size) r.kh <- .1 # Correlation (intelligence, shoe size) n <- 315 # Size of the group cocor.dep.groups.overlap(r.jk, r.jh, r.kh, n, var.labels=c("age", "intelligence", "shoe size"))
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