enrichr | R Documentation |
Gene enrichment using Enrichr
enrichr(genes, databases = NULL)
genes |
(Required). Character vector of gene names or data.frame of gene names in in first column and a score between 0 and 1 in the other. |
databases |
(Required). Character vector of databases to search. See https://maayanlab.cloud/Enrichr/ for available databases. |
Gene enrichment using Enrichr
Returns a list of data.frame of enrichment terms, p-values, ...
Wajid Jawaid wj241@alumni.cam.ac.uk
dbs <- listEnrichrDbs()
dbs <- c("GO_Molecular_Function_2018", "GO_Cellular_Component_2018",
"GO_Biological_Process_2018")
enriched <- enrichr(c("Runx1", "Gfi1", "Gfi1b", "Spi1", "Gata1", "Kdr"), dbs)
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