Man pages for fMRIscrub
Scrubbing and Other Data Cleaning Routines for fMRI
| artifact_images | Artifact images |
| Dat1 | First Example Time Series from the ABIDE |
| Dat2 | Second Example Time Series from the ABIDE |
| data_CompCor_Params | fMRI data for 'scrub' and 'CompCor' |
| DVARS | DVARS |
| emprule_rob | Robust empirical rule |
| FD | Framewise Displacement |
| flags_to_nuis_spikes | Flags to nuisance spikes |
| fMRIscrub | fMRIscrub: fMRI scrubbing and other data cleaning routines |
| high_kurtosis | Which components have high kurtosis? |
| leverage | Leverage |
| noise_Params | noise parameters for CompCor |
| plot.scrub_DVARS | Plot a '"scrub_DVARS"' object |
| plot.scrub_FD | Plot a '"scrub_FD"' object |
| plot.scrub_projection | Plot a '"scrub_projection"' object |
| plot.scrub_projection_multi | Plot a '"scrub_projection_multi"' object |
| plot_scrub_wrapper | Plot scrubbing results |
| projection_name | Get internal name of this projection |
| pscrub | Projection scrubbing |
| pscrub_from_multi | Convert '"pscrub_multi"' to '"pscrub"' |
| pscrub_multi | Compare projection scrubbing measures with 'pscrub_multi' |
| pscrub_Params | pscrub |
| RD_impData | Impute outliers for robust distance |
| RD_meas | Robust distance calculation |
| RD_univOut | Univariate outlier detection for robust distance |
| robdist | Robust distance scrubbing |
| rob_stabilize | Stabilize the center and scale of a timeseries robustly |
| rob_trend | Robust linear model on DCT bases |
| scrub | Data-driven scrubbing |
| scrub_plot | '"scrub"' plot sub-function |
| scrub_xifti | Scrub fMRI data in CIFTI format |
| sd_hIQR | Estimate SD robustly using the half IQR |
| SHASH_out | Robust outlier detection based on SHASH distribution |
| SHASH_to_normal | SHASH to normal data transformation |
| summary.scrub_DVARS | Summarize a '"scrub_DVARS"' object |
| summary.scrub_FD | Summarize a '"scrub_FD"' object |
| summary.scrub_projection | Summarize a '"scrub_projection"' object |
