theme_combmatrix: Theme for the combination matrix

In ggupset: Combination Matrix Axis for 'ggplot2' to Create 'UpSet' Plots

Theme for the combination matrix

Description

This theme sets the default styling for the combination matrix axis by extending the default ggplot2 theme().

Usage

theme_combmatrix(
  combmatrix.label.make_space = TRUE,
  combmatrix.label.width = NULL,
  combmatrix.label.height = NULL,
  combmatrix.label.extra_spacing = 3,
  combmatrix.label.total_extra_spacing = unit(10, "pt"),
  combmatrix.label.text = NULL,
  combmatrix.panel.margin = unit(c(1.5, 1.5), "pt"),
  combmatrix.panel.striped_background = TRUE,
  combmatrix.panel.striped_background.color.one = "white",
  combmatrix.panel.striped_background.color.two = "#F7F7F7",
  combmatrix.panel.point.size = 3,
  combmatrix.panel.line.size = 1.2,
  combmatrix.panel.line.color = "black",
  combmatrix.panel.point.color.fill = "black",
  combmatrix.panel.point.color.empty = "#E0E0E0",
  ...
)

Arguments

combmatrix.label.make_space	Boolean indicator if the y-axis label is moved so far to the left to make enough space for the combination matrix labels. Default: TRUE
combmatrix.label.width	A unit that specifies how much space to make for the labels of the combination matrix. Default: NULL, which means the width of the label text is used
combmatrix.label.height	A unit that specifies how high the combination matrix should be. Default: NULL, which means that the height of the label text + combmatrix.label.total_extra_spacing + #rows * combmatrix.label.extra_spacing is used. Default: 3
combmatrix.label.extra_spacing	A single number for the additional height per row. Default: unit(10, "pt")
combmatrix.label.total_extra_spacing	A unit that specifies the total offset for the height of the combination matrix
combmatrix.label.text	A element_text() to style the label text of the combination matrix. Default NULL, which means the style of axis.text.y is used.
combmatrix.panel.margin	A two element unit vector to specify top and bottom margin around the combination matrix. Default: unit(c(1.5, 1.5), "pt")
combmatrix.panel.striped_background	Boolean to indicate if the background of the plot is striped. Default: TRUE
combmatrix.panel.striped_background.color.one	Color of the first kind of stripes. Default: "white"
combmatrix.panel.striped_background.color.two	Color of the second kind of stripes. Default: "#F7F7F7"
combmatrix.panel.point.size	Number to specify the size of the points in the combination matrix. Default: 3
combmatrix.panel.line.size	Number to specify the size of the lines connecting the points. Default: 1.2
combmatrix.panel.line.color	Color of the lines connecting the points. Default: "black"
combmatrix.panel.point.color.fill	Color of the filled points. Default: "black"
combmatrix.panel.point.color.empty	Color of the empty points. Default: "#E0E0E0"
...	additional arguments that are passed to theme()

Examples

library(ggplot2)
# Ensure that the y-axis label is next to the axis by setting
# combmatrix.label.make_space to FALSE
ggplot(tidy_movies[1:100, ], aes(x=Genres)) +
  geom_bar() +
  scale_x_upset() +
  theme_combmatrix(combmatrix.label.text = element_text(color = "black", size=15),
                   combmatrix.label.make_space = FALSE,
                   plot.margin = unit(c(1.5, 1.5, 1.5, 65), "pt"))

 # Change the color of the background stripes
 ggplot(tidy_movies[1:100, ], aes(x=Genres)) +
   geom_bar() +
   scale_x_upset() +
   theme_combmatrix(combmatrix.panel.striped_background = TRUE,
                    combmatrix.panel.striped_background.color.one = "grey")

ggupset documentation built on June 24, 2024, 5:08 p.m.