API for plasma
Partial LeAst Squares for Multiomic Analysis
| Global functions | |
|---|---|
| CombinedWeights | Man page |
| CombinedWeights-class | Man page |
| Contribution | Man page |
| Contribution-class | Man page |
| MultiOmics | Man page |
| MultiOmics-class | Man page |
| MultiplePLSCoxModels | Man page |
| MultiplePLSCoxModels-class | Man page |
| Outcome | Man page |
| SingleModel-class | Man page |
| TCGA-ESCA | Man page |
| TCGA-LUSC | Man page |
| [,Contribution,ANY,ANY,ANY-method | Man page |
| [,MultiOmics,ANY,ANY,ANY-method | Man page |
| [,MultiplePLSCoxModels,ANY,ANY,ANY-method | Man page |
| assemble | Man page |
| barplot,plasma-method | Man page |
| combineAllWeights | Man page Source code |
| extendCoxModels | Source code |
| fitCoxModels | Man page Source code |
| fitSingleModel | Man page Man page Source code |
| getAllWeights | Man page Source code |
| getCompositeWeights | Man page Source code |
| getFinalWeights | Man page Source code |
| getSizes | Man page Source code |
| getTop | Man page Source code |
| heat | Man page |
| heat,Contribution-method | Man page |
| image,CombinedWeights-method | Man page |
| image,Contribution-method | Man page |
| influencer | Source code |
| interpret | Man page Source code |
| loadESCAdata | Man page Source code |
| loadLUSCdata | Man page Source code |
| m450info | Man page |
| meanModeImputer | Man page Source code |
| mirESCA | Man page |
| painter | Source code |
| pickSignificant | Man page Source code |
| plasma | Man page Source code |
| plasma-class | Man page |
| plasmaEnv | Man page |
| plasmaPredictions | Man page |
| plasmaPredictions-class | Man page |
| plot,MultiOmics,missing-method | Man page |
| plot,MultiplePLSCoxModels,missing-method | Man page |
| plot,SingleModel,missing-method | Man page |
| plot,plasma,missing-method | Man page |
| plot,plasmaPredictions,missing-method | Man page |
| predict,MultiplePLSCoxModels-method | Man page |
| predict,SingleModel-method | Man page |
| predict,plasma-method | Man page |
| prepareMultiOmics | Man page Source code |
| samplingImputer | Man page Source code |
| stdize | Man page Source code |
| summary,CombinedWeights-method | Man page |
| summary,Contribution-method | Man page |
| summary,MultiOmics-method | Man page |
| summary,MultiplePLSCoxModels-method | Man page |
| summary,SingleModel-method | Man page |
| summary,plasma-method | Man page |
| tfESCA | Man page |
| validMultiOmics | Man page Source code |
| validMultipleCoxModels | Man page Source code |
