Files in plasma
Partial LeAst Squares for Multiomic Analysis
NEWS
NAMESPACE
DESCRIPTION
TODO
R/01-impute.R
R/04-extend.R
R/05-interpret.R
R/01-multiOmics.R
R/03-manyCoxModels.R
R/00-loadESCAdata.R
R/06-weights.R
R/02-fitCoxModel.R
inst/doc/interpret.pdf.asis
inst/doc/interpret.pdf
inst/doc/plasma.pdf.asis
inst/doc/plasma.pdf
inst/GeneLists/MAF1.txt
inst/GeneLists/ClinicalBin1.txt
inst/GeneLists/ClinicalCont1.txt
inst/GeneLists/allGenes.txt
inst/GeneLists/RPPA3.txt
inst/GeneLists/Meth4502.txt
inst/GeneLists/Meth4501.txt
inst/GeneLists/mRNASeq1.txt
inst/GeneLists/Meth4504.txt
inst/GeneLists/finalGenes.txt
inst/GeneLists/Meth4503.txt
inst/GeneLists/RPPA2.txt
inst/perl/toppgene.pl
inst/Figure/methods.png
inst/bib/interpret.Rmd
inst/bib/theory.pdf
inst/bib/plasma.bib
inst/bib/escaMOFA.Rmd
inst/bib/plasma.Rmd
inst/bib/plasma.enl
inst/bib/bioinformatics.csl
inst/bib/jss.csl
inst/bib/theory.Rmd
inst/TGOUT/mRNASeq1.tsv
inst/TGOUT/Meth4501.tsv
inst/TGOUT/Meth4504.tsv
inst/TGOUT/Meth4502.tsv
inst/TGOUT/RPPA3.tsv
inst/TGOUT/MAF1.tsv
inst/TGOUT/RPPA2.tsv
inst/TGOUT/allGenes.tsv
inst/TGOUT/ClinicalCont1.tsv
inst/TGOUT/Meth4503.tsv
inst/TGOUT/finalGenes.tsv
inst/TGOUT/ClinicalBin1.tsv
build/vignette.rds
tests/test03-multiplePLS.R
tests/test04-plasma.R
tests/test02-fitCox.R
tests/test05-interpret.R
tests/test01-MO.R
vignettes/interpret.pdf.asis
vignettes/plasma.pdf.asis
data/mirESCA.rda
data/tfESCA.rda
man/01-MultiOmics.Rd
man/05-Contribution-class.Rd
man/04-plasmaPredictions-class.Rd
man/00-imputation.Rd
man/02-fitCoxModel.Rd
man/04-plasma-class.Rd
man/03-manyCoxModels.Rd
man/01-TCGA-ESCA-data.Rd
man/06-CombinedWeights-class.Rd
man/07-esca-type-data.Rd
