Did you mean: hydrogens cluster metal uptake genes gammaproteobacteria

inst/doc/gammaproteobacteria.Rmd:

CRAN
yatah: Yet Another TAxonomy Handler

title: "Taxonomy of Gammaproteobacteria"
output: rmarkdown::html_vignette
bibliography: references.bib

inst/doc/gammaproteobacteria.R:

CRAN
yatah: Yet Another TAxonomy Handler

-------------------------------------------------------------------
gammap_genus <-
taxonomy %>%

vignettes/gammaproteobacteria.Rmd:

GITHUB
abichat/yatah: Yet Another TAxonomy Handler

title: "Taxonomy of Gammaproteobacteria"
output: rmarkdown::html_vignette
bibliography: references.bib

vignettes/gammaproteobacteria.Rmd:

CRAN
yatah: Yet Another TAxonomy Handler

title: "Taxonomy of Gammaproteobacteria"
output: rmarkdown::html_vignette
bibliography: references.bib

README.md:

GITHUB
abichat/yatah: Yet Another TAxonomy Handler

"
#> [5] "Bacilli" "Clostridia" "Epsilonproteobacteria" "Gammaproteobacteria"
#> [9

README.md:

CRAN
yatah: Yet Another TAxonomy Handler

"
#> [5] "Bacilli" "Clostridia" "Epsilonproteobacteria" "Gammaproteobacteria"
#> [9

inst/doc/database-explore.R:

BIOC
metagenomeFeatures: Exploration of marker-gene sequence taxonomic annotations

= "Gammaproteobacteria",
keytype = "Class

R/ppit.R:

GITHUB
BKapili/ppit: Phylogenetic Placement for Inferring Taxonomy

taxonomies for those sequences
# If any are Betaproteobacteria, replace class with "Gammaproteobacteria" since

vignettes/database-explore.Rmd:

BIOC
metagenomeFeatures: Exploration of marker-gene sequence taxonomic annotations

type = "all",
keys = "Gammaproteobacteria",
keytype

inst/doc/database-explore.Rmd:

BIOC
metagenomeFeatures: Exploration of marker-gene sequence taxonomic annotations

type = "all",
keys = "Gammaproteobacteria",
keytype

vignettes/database-explore.Rmd:

GITHUB
HCBravoLab/metagenomeFeatures: Exploration of marker-gene sequence taxonomic annotations

type = "all",
keys = "Gammaproteobacteria",
keytype

tests/testthat/test-shared.R:

GITHUB
SchlossLab/mothuR: Schloss Lab Tools for Reproducible Microbiome Research

", "Proteobacteria", "Bacteroidetes", "Firmicutes", "Bacteroidetes"),
class = c("Bacteroidia", "Gammaproteobacteria

tests/testthat/test-shared.R:

CRAN
schtools: Schloss Lab Tools for Reproducible Microbiome Research

", "Proteobacteria", "Bacteroidetes", "Firmicutes", "Bacteroidetes"),
class = c("Bacteroidia", "Gammaproteobacteria

tests/testthat/test-shared.R:

GITHUB
SchlossLab/schtools: Schloss Lab Tools for Reproducible Microbiome Research

", "Proteobacteria", "Bacteroidetes", "Firmicutes", "Bacteroidetes"),
class = c("Bacteroidia", "Gammaproteobacteria

meta.retrieval: Perform Meta-Genome Retrieval

CRAN
biomartr: Genomic Data Retrieval

# but rather from a subgoup (e.g. from species belonging to the
# Gammaproteobacteria class, a subgroup of the bacteria