ggphylo: Plots a tree or a list of trees using 'ggplot

ggplot.
Description
Plots a tree or a list of trees using

gjuggler/ggphylo: Tools for laying out and plotting phylogenetic data (trees and alignments

Package: ggphylo
Title: Tools for laying out and plotting phylogenetic data
(trees and alignments) with ggplot

R/info.r:

#' Powerful phylogenetic tree and alignment plots with ggphylo
#'
#' \code{ggphylo} provides convenient functions

README.md:

# Powerful phylogenetic tree and alignment plots with ggphylo
`ggphylo` provides convenient functions and tools

inst/tests/test.r:

", {
pdf(file="~/scratch/test.pdf")
ggphylo('((h:1,e:1,l:1,l:1,o:1):1,(w:1,o:1,r:1,l:1,d:1):1)')

tree_layout: Returns a data table defining the line segments

See Also
An early example of this functionality was borrowed directly, with permission,
from the package called ggphylo

tree_layout: Returns a data table defining the line segments

See Also
An early example of this functionality was borrowed directly, with permission,
from the package called ggphylo

tree.normalize.branchlengths: Normalizes the branch lengths of a tree for cleaner

<- tree.normalize.branchlengths(x, push.to.tips=TRUE)
x2 <- tree.normalize.branchlengths(x, push.to.tips=FALSE)
ggphylo(list('push.to.tips=TRUE'=x1, 'push.to.tips=FALSE'=x2), do.plot=TRUE)

vignettes/ggtree.Rmd:

('ggplot2')`, including `r CRANpkg('OutbreakTools')`,
`r Biocpkg('phyloseq')` [@mcmurdie_phyloseq_2013]
and [ggphylo](https

inst/doc/ggtree.Rmd:

('ggplot2')`, including `r CRANpkg('OutbreakTools')`,
`r Biocpkg('phyloseq')` [@mcmurdie_phyloseq_2013]
and [ggphylo](https