crossing_of_crossK: crossing_of_crossK
In TrigosTeam/SPIAT: Spatial Image Analysis of Tissues
View source: R/crossing_of_crossK.R
crossing_of_crossK R Documentation
crossing_of_crossK
Description
Determine if there is a crossing in the cross K curves, to
further detect the existence of potential immune rings.
Usage
crossing_of_crossK(df.cross)
Arguments
df.cross
Data.frame. The output of
calculate_cross_functions. Containing the positions of the
two curves. Columns contain "r", "border" and "theo".
Value
A number. The percentage of the crossing position of the specified
distance.
Examples
df_cross <- calculate_cross_functions(SPIAT::defined_image, method="Kcross",
cell_types_of_interest = c("Tumour","Immune3"),
feature_colname ="Cell.Type", dist = 100)
crossing_of_crossK(df_cross)
TrigosTeam/SPIAT documentation built on Nov. 6, 2023, 3:50 p.m.
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View source: R/crossing_of_crossK.R
| crossing_of_crossK | R Documentation |
crossing_of_crossK
Description
Determine if there is a crossing in the cross K curves, to further detect the existence of potential immune rings.
Usage
crossing_of_crossK(df.cross)
Arguments
df.cross |
Data.frame. The output of
|
Value
A number. The percentage of the crossing position of the specified distance.
Examples
df_cross <- calculate_cross_functions(SPIAT::defined_image, method="Kcross",
cell_types_of_interest = c("Tumour","Immune3"),
feature_colname ="Cell.Type", dist = 100)
crossing_of_crossK(df_cross)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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