marker_intensity_boxplot: marker_intensity_boxplot
In TrigosTeam/SPIAT: Spatial Image Analysis of Tissues
View source: R/marker_intensity_boxplot.R
marker_intensity_boxplot R Documentation
marker_intensity_boxplot
Description
Produces boxplots of marker levels for cells phenotyped as being
positive for the marker, and those that where phenotyped as being negative.
Usage
marker_intensity_boxplot(spe_object, marker)
Arguments
spe_object
SpatialExperiment object in the form of the output of
format_image_to_spe.
marker
String. Marker being queried.
Value
A plot is returned
Examples
marker_intensity_boxplot(SPIAT::simulated_image, "Immune_marker1")
TrigosTeam/SPIAT documentation built on Nov. 6, 2023, 3:50 p.m.
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View source: R/marker_intensity_boxplot.R
| marker_intensity_boxplot | R Documentation |
marker_intensity_boxplot
Description
Produces boxplots of marker levels for cells phenotyped as being positive for the marker, and those that where phenotyped as being negative.
Usage
marker_intensity_boxplot(spe_object, marker)
Arguments
spe_object |
SpatialExperiment object in the form of the output of
|
marker |
String. Marker being queried. |
Value
A plot is returned
Examples
marker_intensity_boxplot(SPIAT::simulated_image, "Immune_marker1")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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