ADAM: ADAM: Activity and Diversity Analysis Module

ADAM is a GSEA R package created to group a set of genes from comparative samples (control versus experiment) belonging to different species according to their respective functions (Gene Ontology and KEGG pathways as default) and show their significance by calculating p-values referring togene diversity and activity. Each group of genes is called GFAG (Group of Functionally Associated Genes).

Package details

AuthorAndré Luiz Molan <andre.molan@unesp.br>, Giordano Bruno Sanches Seco <giordano.bruno@unesp.br>, Agnes Alessandra Sekijima Takeda <agnes.takeda@unesp.br>, Jose Luiz Rybarczyk Filho <jose.luiz@unesp.br>
Bioconductor views GeneSetEnrichment KEGG Pathways
MaintainerJose Luiz Rybarczyk Filho <jose.luiz@unesp.br>
LicenseGPL (>= 2)
Version1.6.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ADAM")

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ADAM documentation built on Nov. 8, 2020, 7:51 p.m.