Files in ANF
Affinity Network Fusion for Complex Patient Clustering
README.md
ANF documentation built on Nov. 8, 2020, 7:51 p.m.
NAMESPACE
DESCRIPTION
build/vignette.rds
R/AffinityNetworkFusion.R
R/SpectralClustering.R
vignettes/ANF.Rmd
vignettes/figs/power_of_FeatureEngineering/power_feature_mirnas_NMI.png
vignettes/figs/power_of_FeatureEngineering/power_feature_fpkm_pval.png
vignettes/figs/power_of_FeatureEngineering/power_feature_fpkm_ARI.png
vignettes/figs/power_of_FeatureEngineering/power_feature_fpkm.mirnas_pval.png
vignettes/figs/power_of_FeatureEngineering/power_feature_mirnas_ARI.png
vignettes/figs/power_of_FeatureEngineering/power_feature_fpkm.mirnas_ARI.png
vignettes/figs/power_of_FeatureEngineering/power_feature_fpkm.mirnas_NMI.png
vignettes/figs/power_of_FeatureEngineering/power_feature_mirnas_pval.png
vignettes/figs/power_of_FeatureEngineering/power_feature_fpkm_NMI.png
vignettes/figs/comparisons-SeeCompanionPaper/comparisons_fpkm.methy450_pval.png
vignettes/figs/comparisons-SeeCompanionPaper/comparisons_fpkm.mirnas_ARI.png
vignettes/figs/comparisons-SeeCompanionPaper/comparisons_fpkm.mirnas_pval.png
vignettes/figs/comparisons-SeeCompanionPaper/comparisons_mirnas.methy450_ARI.png
vignettes/figs/comparisons-SeeCompanionPaper/comparisons_fpkm.mirnas.methy450_pval.png
vignettes/figs/comparisons-SeeCompanionPaper/comparisons_fpkm.methy450_ARI.png
vignettes/figs/comparisons-SeeCompanionPaper/comparisons_fpkm.mirnas_NMI.png
vignettes/figs/comparisons-SeeCompanionPaper/comparisons_mirnas.methy450_NMI.png
vignettes/figs/comparisons-SeeCompanionPaper/comparisons_fpkm.methy450_NMI.png
vignettes/figs/comparisons-SeeCompanionPaper/comparisons_fpkm.mirnas.methy450_ARI.png
vignettes/figs/comparisons-SeeCompanionPaper/comparisons_mirnas.methy450_pval.png
vignettes/figs/comparisons-SeeCompanionPaper/comparisons_fpkm.mirnas.methy450_NMI.png
vignettes/figs/power_of_ANF/power_ANF_vst.sel_pval.png
vignettes/figs/power_of_ANF/power_ANF_raw.all_ARI.png
vignettes/figs/power_of_ANF/power_ANF_normalized_ARI.png
vignettes/figs/power_of_ANF/power_ANF_raw.all_pval.png
vignettes/figs/power_of_ANF/power_ANF_log.sel_ARI.png
vignettes/figs/power_of_ANF/power_ANF_log.all_ARI.png
vignettes/figs/power_of_ANF/power_ANF_log.all_NMI.png
vignettes/figs/power_of_ANF/power_ANF_vst.sel_ARI.png
vignettes/figs/power_of_ANF/power_ANF_vst.sel_NMI.png
vignettes/figs/power_of_ANF/power_ANF_log.all_pval.png
vignettes/figs/power_of_ANF/power_ANF_raw.sel_ARI.png
vignettes/figs/power_of_ANF/power_ANF_log.sel_NMI.png
vignettes/figs/power_of_ANF/power_ANF_raw.sel_NMI.png
vignettes/figs/power_of_ANF/power_ANF_normalized_pval.png
vignettes/figs/power_of_ANF/power_ANF_raw.all_NMI.png
vignettes/figs/power_of_ANF/power_ANF_raw.sel_pval.png
vignettes/figs/power_of_ANF/power_ANF_normalized_NMI.png
vignettes/figs/power_of_ANF/power_ANF_log.sel_pval.png
man/pod.Rd
man/kNN_graph.Rd
man/affinity_matrix.Rd
man/ANF.Rd
man/eval_clu.Rd
man/spectral_clustering.Rd
tests/testthat.R
tests/testthat/testANF.R
tests/testthat/testSpectralClustering.R
inst/NEWS
inst/doc/ANF.Rmd
inst/doc/ANF.R
inst/doc/ANF.html
