ASGSCA: Association Studies for multiple SNPs and multiple traits using Generalized Structured Equation Models
Version 1.10.0

The package provides tools to model and test the association between multiple genotypes and multiple traits, taking into account the prior biological knowledge. Genes, and clinical pathways are incorporated in the model as latent variables. The method is based on Generalized Structured Component Analysis (GSCA).

Package details

AuthorHela Romdhani, Stepan Grinek , Heungsun Hwang and Aurelie Labbe.
Bioconductor views StructuralEquationModels
MaintainerHela Romdhani <[email protected]>
LicenseGPL-3
Version1.10.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("ASGSCA")

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ASGSCA documentation built on May 31, 2017, 3:12 p.m.