NEWS.md

In AnVIL: Bioconductor on the AnVIL compute environment

AnVIL 1.2.0

NEW FEATURES

• (v 1.1.3) introduce .deprecated flag in operations() / tags(); don't include deprecated APIs by default; warn on use of deprecated APIs.

• (v 1.1.4) add repositories() to return binary (if available), Bioconductor, and CRAN repository paths.

• (v 1.1.6) provide md5sum as check on service version.

• (v 1.1.9) add avfiles_*() for managing workspace bucket files.

• (v 1.1.15) add avtable_import_set() to create subsets of tables, following the Terra data model.

• (v 1.1.16) add avruntimes(), avworkspace_jobs() to query for runtimes and jobs associated with the active billing account.

• (v 1.1.17) add avdisks() to query for persistent disks associate with the active billing account.

• (v 1.1.21) add avworkflow_*() for interacting with workflow jobs and outputs.

AnVIL 1.0.x

BUG FIXES

• (v 1.0.1) collapse 'produces' vectors to scalars, for httr::accept()

• (v 1.0.3) access correct binary repository, more robustly

USER VISIBLE CHANGES

• (v 1.0.2) support updated Leonardo listRuntimes() and friends (listClusters() deprecated)

AnVIL 1.0.0

• AnVIL is _finally on Bioconductor!
• Support OpenAPI Specification version 2 (aka Swagger 2.0)
• av, gcloud, gsutil type functions added to interface with AnVIL and the cloud
• Support leonardo, terra, dockstore and gen3* APIs

AnVIL 0.0.20

• Support untagged swagger

AnVIL 0.0.17

• leonardo, terra, dockstore and gen3* symbols not defined; users must create these themselves, e.g., `leonardo <-

• Added a NEWS.md file to track changes to the package.

AnVIL documentation built on Nov. 8, 2020, 4:57 p.m.