Files in ArrayExpressHTS
ArrayExpress High Throughput Sequencing Processing Pipeline

NAMESPACE
DESCRIPTION
man/ArrayExpressHTS.Rd man/ArrayExpressHTSFastQ.Rd man/processing-options.Rd man/prepareReference.Rd man/prepareAnnotation.Rd man/isRCloud.Rd man/package-options.Rd
build/vignette.rds
vignettes/ArrayExpressHTS.Rnw
inst/NEWS
inst/script/gtf2txt.pl
inst/expdata/testExperiment/data/SRR017244.fastq
inst/expdata/testExperiment/data/SRR017248.fastq
inst/expdata/testExperiment/data/testExperiment.sdrf.txt
inst/expdata/testExperiment/data/SRR017245.fastq
inst/expdata/testExperiment/data/SRR017233.fastq
inst/expdata/testExperiment/data/testExperiment.idf.txt
inst/expdata/testExperiment/data/SRR017246.fastq
inst/expdata/testExperiment/data/SRR017247.fastq
inst/expdata/testExperiment/data/SRR017235.fastq
inst/expdata/testExperiment/data/SRR017239.fastq
inst/expdata/testExperiment/data/SRR017240.fastq
inst/expdata/testExperiment/data/SRR017234.fastq
inst/expdata/testExperiment/data/SRR017238.fastq
inst/expdata/testExperiment/data/SRR017241.fastq
inst/expdata/testExperiment/data/SRR017237.fastq
inst/expdata/testExperiment/data/SRR017242.fastq
inst/expdata/testExperiment/data/SRR017236.fastq
inst/expdata/testExperiment/data/SRR017243.fastq
inst/doc/ArrayExpressHTS.pdf
inst/doc/ArrayExpressHTS.Rnw
inst/doc/ArrayExpressHTS.R R/memutil.R R/singlePlots.R R/logutil.R R/varutil.R R/pipeline.R R/onload.R R/project_options.R R/tweaked.R R/reference.R R/package.R R/traceutil.R R/proputil.R R/psrutil.R R/trace.R R/comparedPlots.R R/defaults.R R/optutil.R R/comparedAnalysis.R R/utils.R R/functions.R R/ae2enamap.R R/options.R R/cluster.R R/vars.R
src/hashtable_utility.h
src/hashtable.c
src/addXS.c
src/hashtable_itr.h
src/Makevars
src/functions.c
src/hashtable_itr.c
src/hashtable.h
src/fltbam.c
src/hashtable_private.h
src/hashtable_utility.c
ArrayExpressHTS documentation built on Nov. 17, 2017, 9:27 a.m.