ArrayTV: Implementation of wave correction for arrays

Wave correction for genotyping and copy number arrays

AuthorEitan Halper-Stromberg
Date of publicationNone
MaintainerEitan Halper-Stromberg <Eitan177@gmail.com>
LicenseGPL (>= 2)
Version1.12.0

View on Bioconductor

Functions

ArrayTV Man page
ArrayTV-package Man page
computeGC,BafLrrSetList-method Man page
computeGC-methods Man page
computeGC,numeric-method Man page
gcCorrect Man page
gcCorrect,BafLrrSetList-method Man page
gcCorrect,BafLrrSet-method Man page
gcCorrect,BeadStudioSet-method Man page
gcCorrectMain Man page
gcCorrect,matrix-method Man page
gcCorrect-methods Man page

Files

ArrayTV/DESCRIPTION
ArrayTV/NAMESPACE
ArrayTV/R
ArrayTV/R/AllGenerics.R ArrayTV/R/CorrectM.R ArrayTV/R/calctvScore.R ArrayTV/R/computeGC.R ArrayTV/R/correctionTVscore.R ArrayTV/R/gcCorrectMain.R ArrayTV/R/gcFracAllWin.R ArrayTV/R/gcFracOneRange.R ArrayTV/R/getGCinBestWindowGenome.R ArrayTV/R/methods-gcCorrect.R ArrayTV/R/priorFracs.R ArrayTV/R/priorFracsRestOfGenome.R
ArrayTV/build
ArrayTV/build/vignette.rds
ArrayTV/inst
ArrayTV/inst/doc
ArrayTV/inst/doc/ArrayTV.R
ArrayTV/inst/doc/ArrayTV.Rnw
ArrayTV/inst/doc/ArrayTV.pdf
ArrayTV/inst/extdata
ArrayTV/inst/extdata/afcM1List.rda
ArrayTV/inst/extdata/array_logratios.rda
ArrayTV/inst/extdata/cbs_out.rda
ArrayTV/inst/extdata/nimcM1List.rda
ArrayTV/inst/unitTests
ArrayTV/inst/unitTests/test_gcCorrectMain.R
ArrayTV/man
ArrayTV/man/ArrayTV-package.Rd ArrayTV/man/gcCorrect-methods.Rd ArrayTV/man/gcCorrectMain.Rd ArrayTV/man/methods-computeGC.Rd
ArrayTV/tests
ArrayTV/tests/runTests.R
ArrayTV/vignettes
ArrayTV/vignettes/ArrayTV.Rnw
ArrayTV/vignettes/refs.bib

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